Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1795 ATGGCTAAAGCTATGGAGCAACAGAAAAGAGTTTCTCATGTGTTCGTGTGCAGAGAGTTAAAACCACACCTGTTCATGGTTATAGTCCAGGTGGGATATACCTTATTATATTTCATCACTGAAGCCTCCTTCAATCATGGGATGAGTCCTCATGTCTATGTAACATATCGCCATATTGTGGCCACGGTTGTGATGTTCCCTTTTGCATACTTTCTAGAGAGAGATGCTAGACCAAAGCTGACATTAGCTCTTCTCATGGAAATTTTTTTGCTTTCGCTGTTAGGGGTTAGCGTAACCCTTAACATGTACTTTGCAAGCCTTAACTACACAAATCCGACCTTTGTTGCTTCCATGGTCAACACCATAGCTTCCCTTACCTTCATTATTGCTGTAGCAACCAGGTTTGAGGTTGTTGATGTTTGGAATCCTCGTGGTATTGCAAAAGTTATTGGGACCATGATCTCCTTAGCTGGTGTTTTGATTATGACACTGTACAAAGGACCCGTCATGAGAAATTTATGGCGTCCTCTGATCCACATTCCACGGAAAAGTGCTGCTATCACCGAAGACTGGTTAAAGGGTTCAATTCTTACAGTTTCAAGCTGTGTTGCATGGTCTTTATGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAACTCTCACTCACCACGTGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTTACTGTTATAATAGAACACGACTCTTCTGCATGGACTATGGGGCTAAACATTGACTTGTGGTCCACAATATATGGTGGAGTTGTAGTTGCTGGCTTTTTAATCTACATTCAACTATGGTGCAATGAGAAAAGAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTTCTACTATATTGGTGGCAATTCTAGCCTACTTTGTCTTTGGTGAGAAACTTTATCTGGGCAGCATCATAGGTTCAGTCATTGTCATAATTGGTCTTTACTTGCTGCTATGGGGCAAAGAACGTGACCAAGTGGTTTGCATGAAGAGCACAGATAAGTCACAGTGCAGTGCTGCAGACCCAGAATGCAGAATGTAG 1080 0.4213 MAKAMEQQKRVSHVFVCRELKPHLFMVIVQVGYTLLYFITEASFNHGMSPHVYVTYRHIVATVVMFPFAYFLERDARPKLTLALLMEIFLLSLLGVSVTLNMYFASLNYTNPTFVASMVNTIASLTFIIAVATRFEVVDVWNPRGIAKVIGTMISLAGVLIMTLYKGPVMRNLWRPLIHIPRKSAAITEDWLKGSILTVSSCVAWSLWYIMQASTLKRYPAQLSLTTWMCFVGAAQSAVFTVIIEHDSSAWTMGLNIDLWSTIYGGVVVAGFLIYIQLWCNEKRGPVFVTMFNPLSTILVAILAYFVFGEKLYLGSIIGSVIVIIGLYLLLWGKERDQVVCMKSTDKSQCSAADPECRM* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1795 359 PANTHER WAT1-RELATED PROTEIN 20 349 - -
Vra8g1795 359 Pfam EamA-like transporter family 37 163 IPR000620 GO:0016020|GO:0016021
Vra8g1795 359 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Vra8g1795 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 335 - -
Vra8g1795 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Vra8g1795 359 PANTHER WAT1-RELATED PROTEIN 20 349 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1795 Vra-Chr8 35278439 35280926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1795 21 340 Nodulin-like Gene Family AT5G07050 42.121 2.13e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1795 - - gmx:100527877 613.609