Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1787 ATGTCTGGAAGAGAATTGGGAGTGCTTAATGCACTCGATGTGGCGAAGACGCAATGGTACCACTTCACTGCTATTGTGATTGCTGGAATGGGATTTTTTACTGATGCCTATGATCTCTTCTGTATTTCTCTTGTCACCAAGTTGCTGGGGAGGATATATTACACAGACATATCCAAACCAAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCAGTGACTGGTGTAGCACTGTGCGGTACTTTGGCTGGCCAGCTTTTCTTTGGGTGGCTTGGTGACAAGTTGGGAAGGAAAAAGGTTTATGGCTTAACTCTTATGCTGATGGTAGTGTGTTCCCTTGCCTCGGGGCTCTCTTTTGGAGATACCCCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTATCGGCTACAATAATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGAATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACGATCTTCCCAGTTACAAAGAAAACCCAGAAGGATCAATAGTTCATTCCCTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTCCCAGCTGCGGTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACGGCCCTTGTAGCCAGGAACGCAAAACAAGCTGCTTCAGACATGTCCAAGGTGCTGCAAGTTGAGATTGAAGCTGAAGAGGATAAGTTGAACCACATTGTTGAGAGTGAAAACCAAAGGTATGGTTTGTTCAGCAGGGAATTTGCCAAACGCCATGGGTTGCACTTGATTGGAACCACGGTAACCTGGTTTTTGTTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCAATTGGATGGATCCCTCCTTCACAAGAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTGATAGCACTTTGCAGCACCGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGACGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATACCTTACAATCACTGGACCAAGAAAGAAAACAGAATTGGGTTTGTTGTGATGTACTCTCTGACCTTTTTCTTCTCAAATTTTGGTCCAAATGCCACCACGTTTGTTGTACCAGCAGAGATTTTCCCAGCAAGGTTAAGATCCACCTGTCATGGAATCTCAGCTGCAGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGGTTCTTGTATGCTGCACAGAGTACGAACCCCGAAAAGGTTGATCACGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTGTGCTTGGTGTGGTCAACTTCTTTGGAATGTTATTCACCTTGTTAGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTAAGTGGGGAGAATGAAGAAGGTCCTGAGGCTGTAGAGATGGCAGGGTCTGCTAGGACGGTTCCAGTTTAA 1611 0.4544 MSGRELGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDISKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSLASGLSFGDTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYDLPSYKENPEGSIVHSLDYVWRIILMFGAVPAAVTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVEIEAEEDKLNHIVESENQRYGLFSREFAKRHGLHLIGTTVTWFLLDIAFYSQNLFQKDIFSAIGWIPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWTKKENRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTNPEKVDHGYPTGIGVKNSLIVLGVVNFFGMLFTLLVPESKGKSLEELSGENEEGPEAVEMAGSARTVPV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1787 536 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra8g1787 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 525 - -
Vra8g1787 536 CDD MFS_PhT 25 507 - -
Vra8g1787 536 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vra8g1787 536 MobiDBLite consensus disorder prediction 512 536 - -
Vra8g1787 536 Gene3D MFS general substrate transporter like domains 272 530 IPR036259 -
Vra8g1787 536 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Vra8g1787 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Vra8g1787 536 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 525 - -
Vra8g1787 536 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1787 Vra-Chr8 35158945 35162399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1787 1 523 Inorganic Solute Cotransporters AT3G54700 80.497 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1787 K08176 - gmx:100792177 1006.51