Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1786 ATGGGTGGGCAATCTCTGCATGTGCTTAATGCACTGGATGTTGCTAAGACACAATGGTATCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTCTTCACTGATTCTTATGACCTGTTCTGCATATCCCTGGTCACCAAATTACTTGGCCGAATATACTATACTGTAGGCCATGATAAGCCTGGCTCTCTGCCAGCAAATGTTTCAGCTGCCATCAATGGTGTCGCATTCTGTGGATCCCTTGCAGGCCAACTTTTCTTTGGGTGGCTTGGTGACAAAATGGGAAGGAAGCGTGTCTACGGTATGACCCTTATGCTCATGGTCGTAAGCTCAATTGCTTCTGGTCTTTCCTTTGGTAAAGACCCTAAAGCTGTCATGGCTACCCTTTGTTTCTTCCGCTTCTGGCTTGGATTTGGAATTGGTGGAGACTACCCTCTTTCCGCCACCATCATGGCTGAGTATGCCAACAAGAAGACTCGTGGAGCGTTCATAGCTGCTGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGAGTGGTTGCAATAGTAGTGTCAGCTGCTTTCGGTGCCCTCTATCCCGCTCCAACATTCCAGGTCAACCCACTTCTGTCCACAGTGCCACAAGCTGATTACGTTTGGAGGATAATCTTGATGTTTGGTGCAATCCCTGCTGTGATCACATACTATTGGCGCTTGAAAATGCCCGAGACTGCGAGATACACTGCCTTGGTTGCCAAGAATACGAGCCAAGCTGCTGCAGATATGTCAAAGGTGTTGCAGGTTGAGATAGAAGCTGAACCAGAGAAAGTTGAGGAATTGGAAGGAAGAAGAGGAAGGGGGAATGAGTTTGGCCTGTTCACAAAAGAGTTCCTTCTTCGCCATGGACTTCACCTTGTTGGAACAGCCAGTACTTGGTTCCTGTTGGACATTGCCTATTACAGTCAGAATCTTTTCCAGAAAGACATTTTCAGTACTATTGGTTGGATTCCTCCAGCAAAAACCATGAATGCCATTCAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCTCTTTGCAGTACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGATAAGATGGGCAGGTATACAATTCAGTTGATGGGATTTTTCTTTATGACCGTCTTCATGCTTGCCTTAGCCATTCCATACCACCACTGGACCTTGAGCGGCAACCAAATTGGGTTTGTTGTCCTCTATTCATTGACCTTCTTCTTTGCCAATTTTGGTCCAAATGCCACAACATTCGTGGTGCCAGCAGAGATTTTCCCTGCAAGACTAAGGTCAACATGTCATGGCATATCGGCTGCAGCTGGCAAAGCTGGGGCAATGGTAGGGGCTTTTGGCTTCCTCTATGCTCAAAACGCCATTGGACTAAGAAATACACTTCTTATTTTGTCTGCCATTAACTTCTTGGGGTTTATCTTTACGTTTCTGATTCCTGAATCTAAAGGAAAATCGCTGGAGGAGATGTCTGGTGAAGCTGAACAAAACAATACTCCTACAAGAGAATCAACAATGGAAGCCGGTCTTGAAGTTAGACCATCTGTCTAA 1587 0.4568 MGGQSLHVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYTVGHDKPGSLPANVSAAINGVAFCGSLAGQLFFGWLGDKMGRKRVYGMTLMLMVVSSIASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIAAVFAMQGFGILAGGVVAIVVSAAFGALYPAPTFQVNPLLSTVPQADYVWRIILMFGAIPAVITYYWRLKMPETARYTALVAKNTSQAAADMSKVLQVEIEAEPEKVEELEGRRGRGNEFGLFTKEFLLRHGLHLVGTASTWFLLDIAYYSQNLFQKDIFSTIGWIPPAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVALIDKMGRYTIQLMGFFFMTVFMLALAIPYHHWTLSGNQIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNAIGLRNTLLILSAINFLGFIFTFLIPESKGKSLEEMSGEAEQNNTPTRESTMEAGLEVRPSV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1786 528 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 496 IPR020846 GO:0022857
Vra8g1786 528 MobiDBLite consensus disorder prediction 500 528 - -
Vra8g1786 528 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 515 - -
Vra8g1786 528 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 515 - -
Vra8g1786 528 MobiDBLite consensus disorder prediction 503 517 - -
Vra8g1786 528 Pfam Sugar (and other) transporter 25 503 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vra8g1786 528 TIGRFAM 2A0109: phosphate:H+ symporter 11 505 IPR004738 GO:0005315|GO:0006817|GO:0016021
Vra8g1786 528 SUPERFAMILY MFS general substrate transporter 12 503 IPR036259 -
Vra8g1786 528 Gene3D MFS general substrate transporter like domains 278 520 IPR036259 -
Vra8g1786 528 Gene3D MFS general substrate transporter like domains 20 264 IPR036259 -
Vra8g1786 528 CDD MFS_PhT 25 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1786 Vra-Chr8 35152978 35155201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1786 1 510 Inorganic Solute Cotransporters AT3G54700 77.481 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1786 K08176 - gmx:100792711 913.679