Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1750 ATGCCTTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCTCGTCAACTACGGCAAGGAATATGGGAGGCTCGTCGTCATCGTCGACGTCATTGATCAGAACAGAGCACTTGTCGATGCCCCAGATATGGTGAGAACTCAAGTCAATTTCAAGAGGCTTTCCCTCACCGATATTAAGATTGACATTAAGAGGGTCCCCAAGAAGAAAGATCTTGTTAAAGCCATGGAGGCTGCTGATGTTAAGAACAAATGGGAAAACAGCTCATGGGGCAGGAAACTCATTGTCAAAAAGAGAAGGGCAGCCCTCACTGACTTCGACAGGTTCAAGCTAATGTTGGCCAAGATCAAGAGAGCAGCTGTTGTAAGGCAGGAGCTCTCTAAGCTGAAAAAGAGCGCGTAG 399 0.4762 MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRTQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEAADVKNKWENSSWGRKLIVKKRRAALTDFDRFKLMLAKIKRAAVVRQELSKLKKSA* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1750 132 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Vra8g1750 132 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Vra8g1750 132 Gene3D - 1 84 IPR014722 -
Vra8g1750 132 Gene3D - 92 127 - -
Vra8g1750 132 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 132 - -
Vra8g1750 132 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Vra8g1750 132 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1750 Vra-Chr8 34777144 34778292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1750 1 131 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 81.679 2.45e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1750 K02875 - gmx:100499889 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1750 8 34777144 34778292 Vra8g1750 8 34777144 34778292 ECH