Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1749 ATGGGATTCTATCTTAATCTCAAATTCAAGGCCTTTCGGTTGAAACGGTTTCTGCTTGGACATGGACGCAGAAAAAGAAAGCAGAAGATGGCAAAGAAGCCCTCGTGGATGATGCCAATGACATATGGTTATCATGTGGTGGAACATAATATGAGCAGAGATGATTCTGATAACTCAGACTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGAATCAAACAGAGTTGTGGTATTTTGGAATCTTTGATGCACTGATTGGAGACAGGGTTAGCAAGTACATGCAGTCTCATTTCTTTGACAAGAAGCTTCAAGAGACTCGTTTAAGCAGTAAAAGTAAGGAAGCTCTGAAGAGAGCTTACCATGGCGTAAGAGCAAAGATTAGAGAGGAACACAAATTAGAGGAGACGTGCAGAATGGGTTCGGCATCTGTTATACTGATAAATGGAGAAAAACTTGTAATAGCCAACATGGGGGATTACAGAACTGTTGTGTGCAGAGATGGAATAGCTCATCAGACAACTGGCACATACCGACGATTAGAAAAAATGCACTGGTCTCGCCGACTCTTTGCAGGATGCATGCTGGGACGTCAATCAGGAAATGCAGCAGGTGCAAAACATTCTAGAGGCTCCGACTTTGTGGTTAGAAGTGAAGTGCTTGATTCTGGTACTGAATTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATCAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAAGAAGCTTTAATTAGGATGACCAAAAGCAACATCTCATGCTTAATCATTCGTTTTGACTGA 846 0.4196 MGFYLNLKFKAFRLKRFLLGHGRRKRKQKMAKKPSWMMPMTYGYHVVEHNMSRDDSDNSDFDSVVAQREEMNQTELWYFGIFDALIGDRVSKYMQSHFFDKKLQETRLSSKSKEALKRAYHGVRAKIREEHKLEETCRMGSASVILINGEKLVIANMGDYRTVVCRDGIAHQTTGTYRRLEKMHWSRRLFAGCMLGRQSGNAAGAKHSRGSDFVVRSEVLDSGTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMTKSNISCLIIRFD* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1749 281 SUPERFAMILY PP2C-like 36 281 IPR036457 -
Vra8g1749 281 PANTHER ALPHABET, ISOFORM E-RELATED 5 280 - -
Vra8g1749 281 Pfam Protein phosphatase 2C 220 273 IPR001932 -
Vra8g1749 281 Pfam Protein phosphatase 2C 66 173 IPR001932 -
Vra8g1749 281 CDD PP2Cc 78 280 IPR001932 -
Vra8g1749 281 SMART PP2C_4 51 278 IPR001932 -
Vra8g1749 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 280 - -
Vra8g1749 281 ProSiteProfiles PPM-type phosphatase domain profile. 58 280 IPR001932 -
Vra8g1749 281 Gene3D - 44 281 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1749 Vra-Chr8 34769339 34771809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1749 1 280 PP2C-type Phosphatase Gene Family AT3G23360 46.479 3.14e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1749 K19704 - gmx:100785227 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1749 8 34769339 34771809 Vra8g1749 8 34769339 34771809 ECH