Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1700 ATGGGTTCAATCGAGAATCAAGAAGCCATTGATCTCTTTGAAGGCCAGAATATTTTGTACATGCAGATGTATGGCCACCTTAAACCTTTGTGTCTTAAGTGGGCTGTCCAACTAGGTATTCCAGACATAATACACAACCATGGAAAACCTATTACTCTTTCTCACTTGGTCTCAACCCTTCAAATTCCATCCTCTAAGACTGCTTTTGTGCAGCGGTTAATGCGCTTTTTGGCACACAATGAAATCTTTGATATCCACCATAGCCAAGAAGATCATGAAGTAGCTTATGCCCTAACTCCAGCATCCAAACTTCTTGTCAGTGGCAGTGGCCATTGTTTATCTCCAATGGTTCTGTTCACCACTGATCCACTTCTCATGAGTAAACACCACCACCTGGGAGAATGGATTTACAGGGAGGACCCCACCACACTGTATGAGACAGCCATAGGGACAAGTGTTTGGGGACTTCTTGACAGAGAACCTAAATACTTGAGTCTCTTCAATGAGGGCATGGCGAGTGATTCCCAAATGGTGGACTTGGTTCTTAAAAATTGCAATTCAGTTTTTGAGAATCTAGATTCCATCGTGGACGTAGGTGGTGGAACAGGAACCACAGCCAGAATTATCAGCCAGGCATATCCTAAGCTGAAATGTGTTGTGCTTGACCTTCCTCATGTTATAGCAAACTCCACAGGAACCAACAATTTAAGCTTTCTTGGTGGTGACATGTTCAAATCTATCCCTCAAGCTGATGCAATCCTACTGAAGTGGGTTTTGCATGACTGGGATGACGAAAATTGCGTTAAGATTTTGAAAAACTGCAGAGGAGCTATTTCGAGCAAAGGCAATAAAGGGAAAGTGATTGTCATAGAAACAGTAATAAATGAGAAGCTTGATTACAAAGATGTGACTCAAACAAAGCTCAGTTTGGATATGACAATGTTGGCCATTAATGGAAAAGAGCGAACTGAAGAAGAATGGAAAAAATTGTTCACTGAAGCAGGATTCAAATACCACAAAATATTTCCCATTTTTGGATTTAGATCTCTCATCGAGGTTTATCCATAG 1068 0.4129 MGSIENQEAIDLFEGQNILYMQMYGHLKPLCLKWAVQLGIPDIIHNHGKPITLSHLVSTLQIPSSKTAFVQRLMRFLAHNEIFDIHHSQEDHEVAYALTPASKLLVSGSGHCLSPMVLFTTDPLLMSKHHHLGEWIYREDPTTLYETAIGTSVWGLLDREPKYLSLFNEGMASDSQMVDLVLKNCNSVFENLDSIVDVGGGTGTTARIISQAYPKLKCVVLDLPHVIANSTGTNNLSFLGGDMFKSIPQADAILLKWVLHDWDDENCVKILKNCRGAISSKGNKGKVIVIETVINEKLDYKDVTQTKLSLDMTMLAINGKERTEEEWKKLFTEAGFKYHKIFPIFGFRSLIEVYP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1700 355 PANTHER O-METHYLTRANSFERASE 3 354 IPR016461 GO:0008168
Vra8g1700 355 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 354 - -
Vra8g1700 355 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Vra8g1700 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 354 IPR029063 -
Vra8g1700 355 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Vra8g1700 355 SUPERFAMILY "Winged helix" DNA-binding domain 12 109 IPR036390 -
Vra8g1700 355 CDD AdoMet_MTases 195 294 - -
Vra8g1700 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Vra8g1700 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Vra8g1700 355 Pfam O-methyltransferase domain 130 337 IPR001077 GO:0008171
Vra8g1700 355 Gene3D - 2 105 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1700 Vra-Chr8 34185153 34186483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1700 29 341 Monolignol Biosynthesis Gene Families AT5G54160 34.375 8.66e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1700 K22588 K13262 gmx:100819853 560.066