Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1675 ATGGGCAATCTTTCAAGTCCCAACAGAATATTGGCGTTTCTCTTCCTCACATTGGTCCAAATCCAAAGCAAGGTGTTTTGCTACCAATACAAAGTTGGAGATCTTGATGCTTGGGGCATACCCACCTCAACAAATCCACAAGTCTACAAAAAATGGTCCACATATCACAATCTCACAATTGGAGATTCCCTCCTGTTTCTATACCCACCAAGCCAAGATTCAGTGATTCAAGTTACTGAAGAATCCTACAAGAAGTGCAACATCAAAGACCCTATCTTGTACATGAACAATGGCAACTCTTTGTTTAACATCACATCGAAGGGCCAATTTTACTTCACTAGTGGTGTGGCTGGCCATTGCCAAAAGAATCAGAAGCTTCATATAGCTGTAGGTGAAGGAATAACAGAAAATGTGGATGATGCAGCTGCTCCTGCATCTGCACCCTCTTATCCCACAGTATTTGGCAATATTCCAGTAGCTGCTTCTACCTCAACCCCAACCTCAACCTCATCTCAACTCACTTCAACTTTTCAACTTCTCATCATTGGATTTCTGACATCTGCACTCTTTTCTACCTTATGTGATGCCAAAATGCCCTTACCTTTACCATCACAGGCTTAA 621 0.4203 MGNLSSPNRILAFLFLTLVQIQSKVFCYQYKVGDLDAWGIPTSTNPQVYKKWSTYHNLTIGDSLLFLYPPSQDSVIQVTEESYKKCNIKDPILYMNNGNSLFNITSKGQFYFTSGVAGHCQKNQKLHIAVGEGITENVDDAAAPASAPSYPTVFGNIPVAASTSTPTSTSSQLTSTFQLLIIGFLTSALFSTLCDAKMPLPLPSQA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1675 206 CDD OsENODL1_like 28 130 IPR041846 -
Vra8g1675 206 PANTHER BLUE COPPER PROTEIN 10 188 IPR039391 GO:0009055
Vra8g1675 206 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Vra8g1675 206 PANTHER MAVICYANIN 10 188 - -
Vra8g1675 206 Gene3D - 28 142 IPR008972 -
Vra8g1675 206 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Vra8g1675 206 Pfam Plastocyanin-like domain 45 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1675 Vra-Chr8 33880164 33881426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1675 14 159 Phytocyanin Superfamily AT1G64640 55.705 3.44e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1675 - - gmx:100527517 295.819