Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1674 ATGGGGAGCAGAAGCTACTCCGCCAATCCCGCCGATTACAAGCTTCTAGAAGAAGTTGGTTACGGTGCTAGCGCCACCGTCTACCGGGCAATCTACCTTCCCTACAACGAGGAGGTCGCCGTCAAGTGTCTGGATCTGGATCGATGCAACAGCAATCTCGACGATATAAGGAGGGAGGCGCAGACCATGAGTCTCATCGAGCATCCCAACGTGGTCAGGGCCTTCTGCTCCTTCGTCGTAGACCGCAGTCTGTGGGTGGTCATGGGATTCATGGCGCAGGGCTCCTGCTTGCACCTCATGAAGGCGGCTTATCCAGAAGGATTCGAAGAGGCAGCCATCGGATCTATTCTCAAGGAGACTCTCAAGGCGCTCGAGTACCTCCACCGACATGGACACATTCACCGCGATGTTAAGGCCGGGAATATTCTTCTCGATTCCAACGGTCAGGTCAAGCTCGCCGACTTTGGAGTTTCCGCTTGCATGTTCGACACGGGCGACCGCCAGCGTTCCAGGAATACCTTCGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAGCCTGGAACCGGTTATAATTTCAAAGCGGATATTTGGTCTTTTGGAATCACGGCGTTGGAGTTGGCCCATGGTCACGCACCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACAATTCAGAATGCTCCTCCGGGGCTTGATTATGATCGTGACAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCCGTGGAGAAGTTGCTCAAACACTCCTTCTTCAGACAAGCTAAGCCTCCGGAGCTTTCTGTTAAGAAATTATTTGCTGATTTACCACCTCTGTGGAACCGTGTCAAATCCCTCCAGCTTAAAGATGCAGCTCAGCTAGCACTAAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAAAGTGAATATCATCGGGGAGTTAGTGCGTGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTGCATTGATGCAGGACGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGGTATAAGTGATTTCCAGTTTTCTATGGACAAAAAGAATTCAAATAACTTGCAACAAGATGAGTTTGCAGTACAAGTAGGTAGTAACGACATACCACAGAGTGAGAAGAGAAATGGATCAGTGGCTGAAGCAACATCTTCTACTCTAGAGAATGATACCGGAACAAGCAAGATTAAATCACAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGGTGCCAGGATCAGTGCTTGGTCATTCTTTATCTGAAAAAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTGTCAGGTGAGAAAAGTAATCGTGATATTCGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCACCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAGTCTAATAAGGCCAATCTAGTGCAAATTAAAGGACGGTTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCTCGCCGATCGTCACAGGGGTCTCCAATGAGGAAATCTGCCAGTGTTGGTGATTGGATGGTGGATTACAAACAAATGCCAATTGGTCAGTCCTCCAATGATTCTGCCAATATCAATATTCCTGCATCATTTCTAGTGCCTCATCTTCATAATCTTTTCCAGCAAACATCTATTCAACAGGATCTTATAATGAATATGTTGAATGGCTTGCAATCCGCAGAGGCAAATGATGCTTCTCAGAATGGAAAGTTGCCACCATTGCCTCGCAATTCAGAAAACAATGGAAGTGTTGATACAGCAGTTTCAGAGAGGGAACAGGTGCTGCTAGCCAAAATTTCAGAACTTCAATCTCGGATGATTAATTTGACTGATGAACTAACTTATGAGAAATTAAGATACGTGCAGTTACAACAACAGCTAGCTGCTGTCTACAGCCAAGAACAAAATGGGGAAAGAGAGGAATATGCATGA 2112 0.4531 MGSRSYSANPADYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNLDDIRREAQTMSLIEHPNVVRAFCSFVVDRSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFRQAKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDDDDIAEMREEDENKFFSSYKGISDFQFSMDKKNSNNLQQDEFAVQVGSNDIPQSEKRNGSVAEATSSTLENDTGTSKIKSQSVKLGKTQSGPLVPGSVLGHSLSEKGRAFERFENENQLSGEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSNKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQSSNDSANINIPASFLVPHLHNLFQQTSIQQDLIMNMLNGLQSAEANDASQNGKLPPLPRNSENNGSVDTAVSEREQVLLAKISELQSRMINLTDELTYEKLRYVQLQQQLAAVYSQEQNGEREEYA* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1674 703 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 696 - -
Vra8g1674 703 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1674 703 Gene3D Transferase(Phosphotransferase) domain 1 94 326 - -
Vra8g1674 703 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1674 703 Gene3D Phosphorylase Kinase; domain 1 3 89 - -
Vra8g1674 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 696 - -
Vra8g1674 703 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1674 703 CDD STKc_OSR1_SPAK 12 274 - -
Vra8g1674 703 SUPERFAMILY Protein kinase-like (PK-like) 12 327 IPR011009 -
Vra8g1674 703 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Vra8g1674 703 MobiDBLite consensus disorder prediction 622 644 - -
Vra8g1674 703 MobiDBLite consensus disorder prediction 398 448 - -
Vra8g1674 703 MobiDBLite consensus disorder prediction 398 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1674 Vra-Chr8 33870873 33878702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1674 6 695 MAP Kinase Kinase Kinase Kinase AT4G10730 66.189 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vra8g1674 Pkinase 1.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1674 - - gmx:100783699 1298.88