Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1648 ATGGAGACTCCCTTTCCATTGATGTTTCTGATCACTCTTTGGCTTTTACTGCCTCATCATGCCAAAGCTGAAACTTCCACATATGTAGTTCACATGGACAAGTCGCTCATGCCTCAACTTTTTGCAAGCCATCATGATTGGTATGAATCGATCATCCATTCCATAGACTTGGCAATAGCTGATGATCCATCAAAGCAACAGGAGCTGAAATTAGTGTACACTTATGATGATGCCATGCATGGATTCAGTGCAGTGTTATCATCAGAGGAGTTGGAAAGCCTAAAGAAAGTTGATGGCTTTGTGACAGCTTATCCTGACAGGTCTGCCACCATAGACACCACACACACCTTTGAGTTTCTGTCATTGGACACCCCCGGAGGAATATGGAATGCTTCAAATTTTGGGGAGGGTGTCATTGTGGGTCTCATAGACACTGGAATATGGCCTGAAAGTGACAGTTTCAAAGATGATGGCATGAGCAGAAATATCCCATCCAAATGGAAAGGAACATGCGAGCCAGGACAAGACTTTGATGCCTCCATCTGTAACTTCAAATTGATTGGAGCCAGGTACTTCAACAAGGGTGTGAAAGCAGCGAATCCTAATGTCACAATCAGCATGAACTCAGCGAGAGACACTCAGGGCCATGGAAGCCACACATCATCTACTGTTGCTGGCAATTATGTGAGTGGTGCCTCTTTCTTTGGCTACGCCAAAGGGGTAGCCAGAGGCGTTGCACCTCGAGCTAGGCTTGCCATGTATAAGGTCCTTTGGGATGAAGGGCGTCAAGCCTCTGATGTTCTTGCAGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTCATTTCCATTTCTTTGGGTTTTGACAGTGTTCCGCTTTATGAGGATCCTGTGGCAATAGCTGCTTTTGCAGCAATGGAAAAAGGGGTGCTGGTTTCATCTTCAGCTGGCAATGAAGGTCCTGATGTTGGTACTTTGCATAATGGAATCCCTTGGGTCCTAACAGTTGCAGCAGGCACCATAGACCGCACTTTTGGCAGTTTGGCTCTTGGCAATGGCCAAACCATTGTGGGTTGGACCTTGTTTGCAGCAAACTCCATAGTGGATAATTTTCCACTTATTTACAAAAAGAATCTATCGGCGTGCAACTCGGTTAAACTGTTATCCGAAGCAGCCACGAGAGGGATCATTATATGTGATGCCTTTGACTCAATTTCTGTCCTTGACCAAATAGATCTTGTTACTACAGCCAGTGTGGTAGGAGCTGTGTTTATCTCCGAGGATCCACGGCTACTTGAAACAGGACGTTTGTATTCTCCAAGCATTGTGATCAGCCCAAGTGATGCACCATCCGTGATCAAGTACGCAAAAAGTGTTGAGAATCCCTTTGCCAGCATCAACTTTCAACAAACGTTTGTTGGAATAAAGCCAGCACCAGCTGCTGCATATTACACTTCAAGAGGTCCTTCACCAAGCTACCCGGGGATCTTAAAGCCTGATGTAATGGCACCTGGCTCAAATGTTCTGGCTGCTTTTGTTCCAAATAAACCTTCAGCTAGAATTGGCACAAATGTGTTTCTCTCTAGCGACTACAATTTTTTGTCTGGAACATCCATGGCATGTCCTCATGCATCTGGTGTTGCTGCTCTTCTAAAAGCAGCACACCCTGATTGGAGTGCAGCTGCTATAAGATCTGCACTGGTCACCACTGCCAACCCTTTTGACAACACCCAAAGTCCAATTAGGGATAATGGTAACCCATTGCAATATGCTTCTCCTCTTGCCATGGGAGCTGGTGAGATTGATCCTAACAAAGCACTTGATCCAGGTTTCATATATGATGCCACCCCTCAGGACTACGTTAACCTCCTTTGCGCTTTGGGCTACACACAGAACCAGATCCTAACTATCACAAGATCAAATTTTTACATATGTGCTGATAACCCATCATCTGATCTTAACTACCCTTCTTTTATAGTATTGTACAGTAACAAAACAAGATCAACAGTCCAAAAGTTCAGGAGGACCGTGACCAATGTTGGAGATGGTGCTGCTACGTATAGAGTGAAGGTGAAACAACCTAAGGGCACTGTTGTTAAGGTTTCTCCAGAGACATTGTCGTTTGGCTATAAGAATGAAAAGCAAAACTACTCAGTTACCATAAAGTACAGGAGAAATAAGACGGAAAATATCCCATTTGGGGACATTGTTTGGGTTGAAGATGGTGGTGCACGCAAGGTGAGAAGCCCCATTGTTGTGGCACCTAGTGAAATTGCTTAA 2280 0.4487 METPFPLMFLITLWLLLPHHAKAETSTYVVHMDKSLMPQLFASHHDWYESIIHSIDLAIADDPSKQQELKLVYTYDDAMHGFSAVLSSEELESLKKVDGFVTAYPDRSATIDTTHTFEFLSLDTPGGIWNASNFGEGVIVGLIDTGIWPESDSFKDDGMSRNIPSKWKGTCEPGQDFDASICNFKLIGARYFNKGVKAANPNVTISMNSARDTQGHGSHTSSTVAGNYVSGASFFGYAKGVARGVAPRARLAMYKVLWDEGRQASDVLAGMDQAIADGVDVISISLGFDSVPLYEDPVAIAAFAAMEKGVLVSSSAGNEGPDVGTLHNGIPWVLTVAAGTIDRTFGSLALGNGQTIVGWTLFAANSIVDNFPLIYKKNLSACNSVKLLSEAATRGIIICDAFDSISVLDQIDLVTTASVVGAVFISEDPRLLETGRLYSPSIVISPSDAPSVIKYAKSVENPFASINFQQTFVGIKPAPAAAYYTSRGPSPSYPGILKPDVMAPGSNVLAAFVPNKPSARIGTNVFLSSDYNFLSGTSMACPHASGVAALLKAAHPDWSAAAIRSALVTTANPFDNTQSPIRDNGNPLQYASPLAMGAGEIDPNKALDPGFIYDATPQDYVNLLCALGYTQNQILTITRSNFYICADNPSSDLNYPSFIVLYSNKTRSTVQKFRRTVTNVGDGAATYRVKVKQPKGTVVKVSPETLSFGYKNEKQNYSVTIKYRRNKTENIPFGDIVWVEDGGARKVRSPIVVAPSEIA* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1648 759 Gene3D - 624 755 - -
Vra8g1648 759 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Vra8g1648 759 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Vra8g1648 759 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Vra8g1648 759 CDD PA_subtilisin_like 350 466 - -
Vra8g1648 759 Pfam Fibronectin type-III domain 652 753 IPR041469 -
Vra8g1648 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Vra8g1648 759 PANTHER OS01G0868800 PROTEIN 28 754 - -
Vra8g1648 759 SUPERFAMILY Subtilisin-like 112 610 IPR036852 GO:0004252|GO:0006508
Vra8g1648 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Vra8g1648 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 754 IPR045051 -
Vra8g1648 759 ProSiteProfiles Serine proteases, subtilase domain profile. 116 607 - -
Vra8g1648 759 Gene3D Peptidase S8/S53 domain 137 620 IPR036852 GO:0004252|GO:0006508
Vra8g1648 759 Pfam Peptidase inhibitor I9 27 109 IPR010259 -
Vra8g1648 759 CDD Peptidases_S8_3 110 572 IPR034197 -
Vra8g1648 759 Pfam Subtilase family 135 575 IPR000209 GO:0006508|GO:0008236
Vra8g1648 759 Gene3D - 342 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1648 Vra-Chr8 33520060 33522774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1648 23 758 Subtilisin-like Serine Gene Family AT5G67090 41.480 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1648 - - gmx:100806072 1320.45