Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1644 ATGAATTGCTTCCCTTGTTGTGCAACTAAGAAAAGCCTAAGCAAGAGAGAACACGATGCTCCACCATCAGCACCCGAACCTGCACCAGCAGCACCAGCACCAGCACCAGCACCCGCACCAGTAGCAGCAGCAGCACCAGAAATGAAGAAACAAATTTCCGATGATCACATCTCAGTTGATCCTGAAAATATTAAGGTAAAGGCTTTCACGTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGATTGCCTGTTGGATGAAGGATGTTTCGGGAGAGTATACAAAGGAATAATTCCTGCCACCGGCCAGGTCGTGGCCGTGAAGCAACTCGATCGAAATGGGATCGGTAAGGAAATTCTGACTGCTGTTTCTGATCTATGTATGTTGCAGCATGAGAATCTGGTAAATCTCATTGGTTATTGTACCGATGGTGATCAACGTCTTTTGGTTTACGAGTTGTTTTCTGGGCGCACTCTTGAAAGCCGTCTTTTTGAGAATAAAGAGGATGAAGCACCATTAAACTGGTATGACAGAATGAAAATACTAGCGGGTGCTTCAAAAGGGCTAGAGTACTTACATGAGAGTTCGGACCCTCCAGTTATATTCAAGGATTTGAAAGCGTCGAGCATCTTGGTGGACAATGATTTCAACGTTAAACTACGTGATGTTGGAATGACCAAGCTTTCTGGTGGAGAAAAGATGAACAACGGACCTCCAAGACTTATGGGGAACAATGGTTACTGCGCTCCGGAGTATGTAAGAACAGGTCAAGTCACCAAGAAATCAGACGTCTACAGTTTCGGAGTTATCTTGCTGGAGCTCGTTACTGGACGAAGAGCCATTGACACCACCAGACCAAATGAAGAGCAAAATCTAGTTGCATGGGCAACCCCCTTGTTCAGGGACCCGAAGAGATATCCAGACATGGCGGATCCGGTTCTTAAAAAGAATTTCCCAGATAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCTCGACCTTTGATCAGTGACGTTGTAACTGCTCTCAGTTTTCTTTCTGCTCCTCCTCCTGTTGCAGCACCCCGAAAGAGTAGTGCTGGTGAAAGCGAGAGTGGATCAGTATCAAGAAAGGGGAGCCGTAGATCATCAGTAGATACTGATGGCCGCCTTCCGCCGGTTTCCTCTAAAAATAGTCGCAAAGGCAGCAAAAAATCTTCACTGAAACTGTTAAGCCAGAAGATAAGCCAAAAATCTTCTGAGGAAGATTTAGGACAGAAGAGCAGCAAAAAGTCCTCCAAGAGCAGCAGAAAATCTTCCCTGAGAGGTTTAACCCAAAAGAGCAGTAAAAAATCTTCTAGCAGAAAGAGTAGCAAAGAATCGGAGGATGGAAGCGTTTCCTCAAGCTGCCGTAGCAGCAGTTTGGCATCAGATGATGAAAGGTCTGTGTCAGCTCGTAGCAGCATGAGGCTATCACAAGCGAGTGATCAATCTGACTCCAACTACAGCAGCAGAAGGACAGAAGATGCGGACCATAACCTACTAGACCGTGCAAGCACCATGGAATCTGATGTGGGAAGTGGTCACCCTTTTGACCAAACTAGCAGCAGTGGATCAAGCGTTTACTCTCGATAA 1644 0.4592 MNCFPCCATKKSLSKREHDAPPSAPEPAPAAPAPAPAPAPVAAAAPEMKKQISDDHISVDPENIKVKAFTFRELATATKNFRQDCLLDEGCFGRVYKGIIPATGQVVAVKQLDRNGIGKEILTAVSDLCMLQHENLVNLIGYCTDGDQRLLVYELFSGRTLESRLFENKEDEAPLNWYDRMKILAGASKGLEYLHESSDPPVIFKDLKASSILVDNDFNVKLRDVGMTKLSGGEKMNNGPPRLMGNNGYCAPEYVRTGQVTKKSDVYSFGVILLELVTGRRAIDTTRPNEEQNLVAWATPLFRDPKRYPDMADPVLKKNFPDKDLNQVVAIASMCLQEEAEARPLISDVVTALSFLSAPPPVAAPRKSSAGESESGSVSRKGSRRSSVDTDGRLPPVSSKNSRKGSKKSSLKLLSQKISQKSSEEDLGQKSSKKSSKSSRKSSLRGLTQKSSKKSSSRKSSKESEDGSVSSSCRSSSLASDDERSVSARSSMRLSQASDQSDSNYSSRRTEDADHNLLDRASTMESDVGSGHPFDQTSSSGSSVYSR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1644 547 MobiDBLite consensus disorder prediction 466 504 - -
Vra8g1644 547 MobiDBLite consensus disorder prediction 11 47 - -
Vra8g1644 547 MobiDBLite consensus disorder prediction 360 547 - -
Vra8g1644 547 Gene3D Phosphorylase Kinase; domain 1 42 155 - -
Vra8g1644 547 PANTHER RECEPTOR-LIKE KINASE LIP1 1 459 - -
Vra8g1644 547 ProSiteProfiles Protein kinase domain profile. 81 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1644 547 MobiDBLite consensus disorder prediction 505 521 - -
Vra8g1644 547 MobiDBLite consensus disorder prediction 23 41 - -
Vra8g1644 547 MobiDBLite consensus disorder prediction 529 547 - -
Vra8g1644 547 Pfam Protein tyrosine and serine/threonine kinase 86 352 IPR001245 GO:0004672|GO:0006468
Vra8g1644 547 MobiDBLite consensus disorder prediction 392 422 - -
Vra8g1644 547 PANTHER OS07G0668900 PROTEIN 1 459 - -
Vra8g1644 547 SUPERFAMILY Protein kinase-like (PK-like) 61 357 IPR011009 -
Vra8g1644 547 Gene3D Transferase(Phosphotransferase) domain 1 157 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1644 Vra-Chr8 33492744 33495496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1644 63 360 Glycoside Hydrolase AT3G07070 61.000 1.05e-134 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vra8g1644 PK_Tyr_Ser-Thr 7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1644 - - pvu:PHAVU_007G115500g 705.671