Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1632 ATGGCTTCTCTCTCATGCTCCTCCGACCTCGCTACACTCATCAACCACACCGCCGCCGCCAACTACCTCTGTAACCAATTCGATTCCATTTCCAGAAAGCTCAACGATGCCACCTACGCCGTCGATAACACCTACCTTCTTTTCTCCGCCTATTTGGTATTCGCCATGCAGCTGGGTTTCGCCATGCTCTGCGCTGGATCCGTCCGAGCAAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCAGGAGGCCTCTCCTACTACCTCTTCGGCTTCGCTTTTGCCTTCGGCGCCCCTTCTAACGGTTTCATCGGCCGCCACTTCTTCGGCCTTAGAGACTACCCCACCCCCTCCACCGACTACAGCTTCTTCCTCTACCAGTGGGCCTTCGCCATCGCCGCCGCTGGAATCACCAGCGGCTCCATCGCGGAGAGAACGCAATTCGTTGCTTACCTCATTTACTCTTCTTTTCTAACCGGGTTCGTTTACCCCATCGTTTCGCATTGGTTCTGGTCGGGGGACGGTTGGGCCAGCGCCACAAGAGTCGACGGGAACGTCTTGTTCGGGTCCGGGGTCATCGACTTTGCTGGCTCCGGAGTGGTTCATATGGTTGGTGGCATAGCGGGGCTGTGGGGGGCTTTAATTGAAGGCCCGAGAATCGGGCGGTTCGACAGGACGGGCCGGTCCGTTGCACTGCGCGGCCACAGCGCGTCTTTGGTTGTGTTAGGCTCGTTTCTATTATGGTTCGGGTGGTACGGGTTCAATCCCGGTTCCTTTTTTACTATAGCGAAGGGATATGCGGGCTTGGGTTATTATGGTCAATGGAGTGCCATAGGGAGGACAGCTGTCACGACGACATTGGCCGGGAGCACAGCGGCTCTGACAACGCTTTTCAGCAAGCGGTTATTGGTGGGCCACTGGAACGTGATCGACGTGTGTAATGGACTACTTGGCGGGTTCGCTGCCATCACCTCAGGCTGTGCGGTTGTGGAGCCGTGGGCCGCGATAGTGTGTGGGTTTGTGGCCGCCTGGGTTTTGATTGGGCTAAACAAGCTGGCAGCGAAAGTGGAGTACGATGACCCTTTGGAGGCGGCGCAGCTTCACGGCGGGTGTGGCGCCTGGGGGGTGTTGTTCACGGGGCTGTTCGCGAAGAGGGAGTACGTGGAAGAGATTTATGGAATTGGGAGGCCGTGCGGGGCGTTGATGGGGGGCGGCGGGAAGTTGCTGGCGGCGCAGTTGATTCAAATAGTGGTGGTGTGTGGGTGGGTTACGGCGACGATGGGGCCATTGTTCTACGGGCTTCATAAGTTGAATCTGTTGAGGATATCGAGGGACGATGAAACTGCAGGGATGGATTTGACGAGGCATGGAGGGTTTGCTTATGCGTACCATGACGATGAAGATGGTTCTAGCAGAGGCGTAGGATTGATGATGCGTAAAATAGAACCTGATAGTACTTCTCCCTCTCCCCCCGCTCCACCTCTATCAATATCTTCTCTTTAG 1515 0.5637 MASLSCSSDLATLINHTAAANYLCNQFDSISRKLNDATYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPTPSTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSGDGWASATRVDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFFTIAKGYAGLGYYGQWSAIGRTAVTTTLAGSTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGLNKLAAKVEYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPCGALMGGGGKLLAAQLIQIVVVCGWVTATMGPLFYGLHKLNLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSRGVGLMMRKIEPDSTSPSPPAPPLSISSL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1632 504 PANTHER AMMONIUM TRANSPORTER 10 497 - -
Vra8g1632 504 TIGRFAM amt: ammonium transporter 42 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Vra8g1632 504 Gene3D Ammonium transporter AmtB like domains 19 481 IPR029020 -
Vra8g1632 504 SUPERFAMILY Ammonium transporter 39 446 - -
Vra8g1632 504 MobiDBLite consensus disorder prediction 490 504 - -
Vra8g1632 504 ProSitePatterns Ammonium transporters signature. 198 223 IPR018047 GO:0008519|GO:0016020|GO:0072488
Vra8g1632 504 Pfam Ammonium Transporter Family 45 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vra8g1632 504 PANTHER AMMONIUM TRANSPORTER 10 497 - -
Vra8g1632 504 MobiDBLite consensus disorder prediction 483 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1632 Vra-Chr8 33394910 33396739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1632 21 501 Inorganic Solute Cotransporters AT1G64780 80.412 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1632 K03320 K07573 gmx:100797209 865.529