Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1578 ATGGCGGATTCTTCAAGCAACTCCAAGGATAAGAACAACACGCGCCTCTACCATCCCTACCAGGACCTCGACGTACCAATCCAAAAACTCTATAACCTCCCCACCGCGCCGGAGCACCTCTTCTCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGACAACCTCCAGTACTACACCGGCACCGCCTACCTCTCCGGTGCAATCATCGGCGCCACCAGAGGCACCGTCCAGGGCCTCCGCGAGGCCGAGTCCGGGGACTCCCTCAAAATCCGTCTCAACCGAGTGCTCAACTCGGGCGGCCACGCGGGTCGCAAACTCGGCAACTCGCTCGGCGTCCTGGGTCTCATCTTCGCCGGCCTCGAGAGTGGGATGATCCACGCCAGGAGCACCGATGACTTAGTCAACAGCGCCATCGCGGGACTCGGCACCGGAGCGCTCTACAGGGCCGCCGCGGGACCTCGATCGGCTGCCATTGCCGGTGCCATCGGAGGGATCGCCGCGGCGGCGGCGGTTGGAGGAAAGCAGGCTTTGAAGAGATACATACCGATCTAG 555 0.6342 MADSSSNSKDKNNTRLYHPYQDLDVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGTAYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLESGMIHARSTDDLVNSAIAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1578 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
Vra8g1578 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Vra8g1578 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1578 Vra-Chr8 32828147 32829023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1578 2 184 Chloroplast and Mitochondria Gene Families AT1G72750 55.914 1.92e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1578 K17794 - gmx:100779163 286.189