Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1559 ATGGCTTTTTCTCACGACTTGGAGTTGGAATCCTCTTCTCCCCCTCTCGTGTTTGACGTGCGGAGGAGCGAACCAGAGCTGGTGGCTCCGGCCAAGCCCACTCCCCACGAAACCAAGCTGCTATCAGACATAGACACCCAACAGGGCCTCCGAATCCAAATTCCAATCATACAGTTCTACAGAAACAACCCATCAGTAGCAGGGAAGGACCCGGTTAAAGCAATTAGACACGCTCTCGCTGAAACCCTAGTTTTCTACTACCCGTTGGCTGGAAGGATTAAGGACGGTCCTGACGGAAGCCTGGTGGTGGATTGCAACGAGGAGGGTGTGATGTTCATCGAGGCCGATGCTGATATCACACTCCAACAATTCGGTCACACTCTTAAACCCCCTTTCCCGAACTTCCAAGAACTCCTTTACCAACCTCCCGGTTCGGAAGCGGTCACTGATACACCCATTTTTATTATACAGGTGACGCGTTTGAAGTGCGGTGGTTTCATCTTTACGCTCCGTTTCAACCACACCATAGTCGACGGAGTTGGCGCCTTTCAGTTCGCAACTACCGTGGCAGGGATAGCTCGGGGAGTCTTCCAAGAACCTCCATTCGAGCCTTTGTGGCATAGGGACCTTCTCTTAGCCAGGGACCCGCCACGTGTCACATTTAACCATCGGGAGTACGAGCAACTCACAGACTCCGGCGACGCCGTTCCACAGAACTACGAGCAACGGTCATTCTTCTTCGGCCCTGCCGAAACTGCCGCCATCCGCGCCCTCCTCCCCCGTGACCTCGACGAGCACGCCACCACCTTCGAGGTGTTGACGTCTTACGTCTGGCGCTGCCGCACAAGAGCGCTTCAGTTCAATCCGAAGGAGGACGTCCGAATGATGTGCATCGTCGATGCACGTGGCAAGTTCACGTCGGCCTCACTGACTAATTATTATGGTAGCTGCTTCGGGTTTCCGGCAGCTGTGGCCGCCGCCGGAGAGATTTCCTCGGAGCCGTTGGAGTATGCGGTGAGACTGATACAGAAGGCAAGGGGCGAGGTGAGCGAGGAGTATGTTCACTCGGTGGCGGATCTGATGGCGACTTCGGGAAGGCCTTTGTTTACTGTGGTGAGGTCGTGTCTGGTTTTGGATACGACGGATATTGGATTTAGAGATTTGGATTTCGGGTGGGGGAAGGCGGTGTACGGAGGAATGGCCGTTGCTGGTGCTGGGACGTTTCCTGCAGTTAACTTTCATGTCCCTAGTGAGAACGCGAAGGGAGAGGAAGGGATTCTGGTTTTGGTTTCCTTGCCTTCACAAGTTATGAAAATCTTTGCCAAAGAGTTGGATGACAATTTGGTTAAGACCAACACAACAATCTAG 1368 0.5351 MAFSHDLELESSSPPLVFDVRRSEPELVAPAKPTPHETKLLSDIDTQQGLRIQIPIIQFYRNNPSVAGKDPVKAIRHALAETLVFYYPLAGRIKDGPDGSLVVDCNEEGVMFIEADADITLQQFGHTLKPPFPNFQELLYQPPGSEAVTDTPIFIIQVTRLKCGGFIFTLRFNHTIVDGVGAFQFATTVAGIARGVFQEPPFEPLWHRDLLLARDPPRVTFNHREYEQLTDSGDAVPQNYEQRSFFFGPAETAAIRALLPRDLDEHATTFEVLTSYVWRCRTRALQFNPKEDVRMMCIVDARGKFTSASLTNYYGSCFGFPAAVAAAGEISSEPLEYAVRLIQKARGEVSEEYVHSVADLMATSGRPLFTVVRSCLVLDTTDIGFRDLDFGWGKAVYGGMAVAGAGTFPAVNFHVPSENAKGEEGILVLVSLPSQVMKIFAKELDDNLVKTNTTI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1559 455 Gene3D - 224 444 IPR023213 -
Vra8g1559 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 449 - -
Vra8g1559 455 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 14 449 - -
Vra8g1559 455 Gene3D - 17 223 IPR023213 -
Vra8g1559 455 Pfam Transferase family 22 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1559 Vra-Chr8 32664470 32666299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1559 27 444 Monolignol Biosynthesis Gene Families AT5G48930 28.176 5.57e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1559 K19861 - gmx:100820325 726.087