Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g1547 | ATGGAGTGCAACAAGGATGAGGCGGTGAGGGCTAGGCAAATGGCCGAAGCTAGAATGCAAAGTGGTGAATTTGTGGAGGCACTCAGATTGGCTACCAAGGCTAAAAAGCTGTATGCTGATGTTGAAAACATTACTCAGATTCTTACCATCTGTGAGGTTCACAATGCTGCAAATAAAAAGGTCTCTGCCACTGAAATGGACTGGTATGCGATACTTCAGATCGAAAGATTTGCTGATGAAGCAATCATAAAGAAACAGTACAGGAGGCTCGCACTGCTACTTCATCCTGACAAGAACAAGTATGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGCAAGCCAATGGGGTCTTGAGTGACCAAGAAAAACGTTCTTTGTATGACAGCCGGTTCGGAATCTCTGTGAGAGGTGCTGCGAAGAAATCCACTGCAAAACGTGGTGCAGAAAAATGCCAGAGAAGTTCTGAATCACAACGTAATTCACATGGGAATGTGTTCACTGCAAAGCGTGATGAACATGCAACAAATTATCAAAAGAATTCTTATCCTAACTCCGCTGATTCCAACAACCAAGCTGGGCCGACGACATTCTGGACAACTTGCCCACATTGTGGTTTTCAGTTCGAGTACTTAATACGATATGCGTATACGAACTTATTATGTATGCAGTGCTTTAAATCATATAAAGGTAATGTTTTTAGTTTTGGTGCTCCACCGCCACAGCCAAAGTTTACTTCAGTAAATATCCCGAAAGAGGCTCCAGTTCCTGGTCCCCCAAAACCAGATTCAGAAAGCCATGTTCAGAAACCCTTTGGTAGAGAACGTACTGCCAGGTTTGTGCGGTCAGATACTACATCTATGAAAAAATGTGCTGCTGGAGTTGGTGCTCATTGTGAAAAGAGTAAAGATGGCTCTGTTCCTGCATCCAAAGTCATGGAGTCACAATGCTCTAAAAATGTTGGAAGTAAGAGGGTAAGACAGTCAGCACCAGATTCAGGAAAAAGCTTCAAAGATAGAAACAGTGGTGAGATGAGAGATGCTAATGTTCGAGAAAATGATATTGATCATTCAAGAGCTGGTGCAAGGAGATCTTCAAGGAAAAAACAACGTGTTTCATATACGGAAACCTCTGAAGATGAAGATCTTGAATTTCCTTCCAAATCGCCACGACAAAATGAACCACTTAAAACCGATGACGTTGAGAATAAGACTGTTCCGTCAAGTAATGGAGCGTCCAACAGCAACAATCCAGCTACTTCAACTGCTGGTGTGGCTGATCAGAACACGGAGAATGTATCCGAGTCAAAAGAGCATAACTGCTCTTCACCGGATTCAAATATTCCTTCTAGTCCAGACATCCTTTCTTGTTTTGACGCAGAATTCAATGATTTCGAAATGGACAAGGAGGCGGATCGCTTTGCTGTTAATCAAATATGGGCAGTGTATGATGATAGCGGTGATGCGATGCCAAGATTTTATGCTATAGTCAAGAAAGTGTTTTCCCCTTTCATGTTGCAGATTACTTGGTTGGAGGCTGATCCACATTACAAAGAAGACCTTGATTGGCAGGATGCAGATTTGCCTATTGCCTGCGGTAGGTTCAGACTTGGCAGTTCTCAGAAAACTACAGATCGTACTATGTTCTCTCATCAGGTGCGGTGTGTAAAAGAAACTGGCAAAGGTTCTTATCTGGTATATCCCCGTAAAGGAGAAACATGGGCAATTTTCAGAGATTGGGATATAAAATGGAGTTCTGATCCAAATAAACATTTAGCGTATGACTATGACTACGTGGAGATCTTATCAGATTTCTCTGATAACGTGGTCATCGCTGTTGCCTATCTGGGCAAAGTGAAAGGATTTGTTAGCCTCTTTCAGCAAACGTCGGAGAATGGAGCGGTCAATTTTTATGTCCGGCCTCACGAGCTTTATAGGTTCTCGCATCAAATTCCTTCTTATAAGATGTCTGGTAATGAGAGGGAGGGTGTTCCAAGAGGATCTTTTGAATTTGATCCTGCTGCCTTGCCTTCTAATCTCTTTGAAGTTGGTGATTCGGGTAATTTGAAGATGAATAGCTGA | 2079 | 0.4262 | MECNKDEAVRARQMAEARMQSGEFVEALRLATKAKKLYADVENITQILTICEVHNAANKKVSATEMDWYAILQIERFADEAIIKKQYRRLALLLHPDKNKYAGAEAAFKLIGQANGVLSDQEKRSLYDSRFGISVRGAAKKSTAKRGAEKCQRSSESQRNSHGNVFTAKRDEHATNYQKNSYPNSADSNNQAGPTTFWTTCPHCGFQFEYLIRYAYTNLLCMQCFKSYKGNVFSFGAPPPQPKFTSVNIPKEAPVPGPPKPDSESHVQKPFGRERTARFVRSDTTSMKKCAAGVGAHCEKSKDGSVPASKVMESQCSKNVGSKRVRQSAPDSGKSFKDRNSGEMRDANVRENDIDHSRAGARRSSRKKQRVSYTETSEDEDLEFPSKSPRQNEPLKTDDVENKTVPSSNGASNSNNPATSTAGVADQNTENVSESKEHNCSSPDSNIPSSPDILSCFDAEFNDFEMDKEADRFAVNQIWAVYDDSGDAMPRFYAIVKKVFSPFMLQITWLEADPHYKEDLDWQDADLPIACGRFRLGSSQKTTDRTMFSHQVRCVKETGKGSYLVYPRKGETWAIFRDWDIKWSSDPNKHLAYDYDYVEILSDFSDNVVIAVAYLGKVKGFVSLFQQTSENGAVNFYVRPHELYRFSHQIPSYKMSGNEREGVPRGSFEFDPAALPSNLFEVGDSGNLKMNS* | 693 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 250 | 284 | - | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 368 | 400 | - | - | |
Vra8g1547 | 692 | SUPERFAMILY | Chaperone J-domain | 62 | 130 | IPR036869 | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 266 | 282 | - | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 401 | 449 | - | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 144 | 190 | - | - | |
Vra8g1547 | 692 | CDD | DnaJ | 67 | 120 | IPR001623 | - | |
Vra8g1547 | 692 | PRINTS | DnaJ domain signature | 69 | 87 | IPR001623 | - | |
Vra8g1547 | 692 | PRINTS | DnaJ domain signature | 87 | 102 | IPR001623 | - | |
Vra8g1547 | 692 | PRINTS | DnaJ domain signature | 103 | 123 | IPR001623 | - | |
Vra8g1547 | 692 | PRINTS | DnaJ domain signature | 123 | 142 | IPR001623 | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 330 | 360 | - | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 298 | 449 | - | - | |
Vra8g1547 | 692 | PANTHER | - | 1 | 688 | - | - | |
Vra8g1547 | 692 | Gene3D | DnaJ domain | 50 | 145 | IPR036869 | - | |
Vra8g1547 | 692 | ProSiteProfiles | dnaJ domain profile. | 67 | 131 | IPR001623 | - | |
Vra8g1547 | 692 | PANTHER | DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN | 1 | 688 | - | - | |
Vra8g1547 | 692 | Pfam | DnaJ domain | 67 | 128 | IPR001623 | - | |
Vra8g1547 | 692 | SMART | dnaj_3 | 66 | 123 | IPR001623 | - | |
Vra8g1547 | 692 | MobiDBLite | consensus disorder prediction | 308 | 329 | - | - | |
Vra8g1547 | 692 | Pfam | Domain of unknown function (DUF3444) | 453 | 659 | IPR024593 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g1547 | Vra-Chr8 | 32458802 | 32461743 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g1547 | 47 | 230 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT5G64360 | 31.720 | 4.80e-21 | 95.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g1547 | - | - | gmx:102662460 | 903.279 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra8g1547 | 8 | 32458802 | 32461743 | Vra8g1547 | 8 | 32458802 | 32461743 | ECH | |
Vra10g0606 | 10 | 11945307 | 11956965 | Vra8g1547 | 8 | 32458802 | 32461743 | PCT |