Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1544 ATGGCTGGGACCAACGAACTCAACCCCAACGATTCTAAGATGGTGGTTCCGCTGAATATGTGGGTTTTGATCTCAAATTTCAAGTTGGCATACAATCTTCTTCGTCGTCCGGATGGCACTTTCAACCGGGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCGGCAAATGCGAACCCCGTGGATGGAGTGTTCTCTTTTGATGTCATTGTTGACCGTGAAACCAATCTCCTTACGCGAATCTATCGTCCTGCTGAGGGAGAAGAGCGTCCAGTGAGCATTCTTGAGCTTGAGAAACCTGTGAGCTCTGAGGTTGTTCCTGTCATCATATTCTTCCATGGTGGAAGTTTTGCTCATTCTTCAGCCAATAGTGCCATATATGATACGCTATGTCGTCGCCTGGTTGGTATCTGTAAGGCCGTTGTGGTGTCTGTGAACTATAGGCGTGCACCTGAGAATAGGTATCCCTGTGCTTACGATGATGGGTGGACAGCTCTTAAGTGGGTTAGCTCTAGATCTTGGCTTCAGAGTCGGAAAGATAAGAAAGTTCATATCTACATGGCTGGGGATAGCTCGGGTGGGAACATTGTGCACCATGTTGCTCTCAAAGCTGTGGAGTCCGGAATTGAATTGTTTGGGAATGTTCTGCTCAACCCATTGTTTGGTGGGCAGGAAAGAACCGACTCGGAGAAGCGTTTAGATGGGAGATATTTTGTAAGAGTGAAGGATCGAGACTGGTATTGGAGGGCTTTTCTTCCTGAAGGGGAAGATAGAGACCATCCTGCATGTAACCCGTTTGGGCCAAAGGGGCAAAGCCTTGAAGGGACTGTCTTTCCCAAGAGCCTTGTAGTGGTTGCTGGTTTAGACCTTGTTCAGGACTGGCAACTGGGTTATGCCAAAGGGCTTGAGAAGGCTGGCCAGGAAGTGAAATTGCTATTCCTGGAGCAAGCAACCATTGGGTTTTACTTGCTGCCAAATAATGAGCACTTCTCTTCTGTTATGGACGAGATAAAATATTTTGTCAGCCCTGACTGTTGA 1035 0.4744 MAGTNELNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPAEGEERPVSILELEKPVSSEVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSRKDKKVHIYMAGDSSGGNIVHHVALKAVESGIELFGNVLLNPLFGGQERTDSEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHPACNPFGPKGQSLEGTVFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQEVKLLFLEQATIGFYLLPNNEHFSSVMDEIKYFVSPDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1544 344 SUPERFAMILY alpha/beta-Hydrolases 33 337 IPR029058 -
Vra8g1544 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vra8g1544 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Vra8g1544 344 PANTHER GIBBERELLIN RECEPTOR GID1C 3 340 - -
Vra8g1544 344 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Vra8g1544 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vra8g1544 344 PANTHER ARYLACETAMIDE DEACETYLASE 3 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1544 Vra-Chr8 32433360 32435956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1544 1 344 Carbohydrate Esterase AT3G05120 75.942 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1544 K14493 - gmx:100815161 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1544 8 32433360 32435956 Vra8g1544 8 32433360 32435956 ECH