Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1543 ATGATAGCTGATTCTTCTCGAGGCATCGCATTTGTGTGCAACAACATTGCAGAGTATGGGGGTGATCCTAACAGAATTTACCTAATGGGACAATCAGCTGGAGCACATATTGCTGCATGTGTAATAGTGGAGNAGGCAATCAAAGAGGCAGGTGAAGGAGAGAGTACATCTTGGAGTCTTTCCCAGATTAAGACTTATTTTGGTTTATCTGGAGGGTATAATTTATTTAACCTAGTAGATCATTTCCACAGTAGGGGTCTTTATCGGTCCATCTTTCTAAGCATAATGGAAGGGGAGGAATCCCTGAGACGGTTTTCTCCAGAAGTAATGGTTCAAGATCCAAACATTGGAAATGTGAATTCTCTACTACCTCCTGTAGTGCTTTTTCATGGGACTGGGGATTATTCAATACCATCAGATTCCAGGTTTGTGTCCACCCGTTCTAAATATTTTCTAACAATCGAAAACAGGAGTATATATTGA 483 0.4058 MIADSSRGIAFVCNNIAEYGGDPNRIYLMGQSAGAHIAACVIVEXAIKEAGEGESTSWSLSQIKTYFGLSGGYNLFNLVDHFHSRGLYRSIFLSIMEGEESLRRFSPEVMVQDPNIGNVNSLLPPVVLFHGTGDYSIPSDSRFVSTRSKYFLTIENRSIY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1543 160 Gene3D alpha/beta hydrolase 1 144 IPR029058 -
Vra8g1543 160 Pfam BD-FAE 2 139 - -
Vra8g1543 160 PANTHER ARYLACETAMIDE DEACETYLASE 1 147 - -
Vra8g1543 160 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 1 147 - -
Vra8g1543 160 SUPERFAMILY alpha/beta-Hydrolases 2 140 IPR029058 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1543 1 141 Carbohydrate Esterase AT1G26120 77.305 6.13e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1543 K15889 - vra:106770544 321.242