Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1534 ATGGCTTTGTTACTGCCACCGCTTCATCTTACAACTTCCTATCTCAGCACAAGCACCATTGTGGCTCTCTGTGTATTCTTCACCCTCCTAGGCACTTGTGTCATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCTAATGAATCCATCATTGCCCTCCTTCTGGGTTTGTGTGCTGGGACGGTGGTGTTGTTTGTCACTAACTTTAAAAGTGCCAAGATTTTAATATTCAGTGAAGACTTGTTCTTTCTCTACTTGCTTCCCCCTATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACCATTATACTGCTCTTTGGAGTCATTGGAACAGTTATTTCGTTCTGTCTTATATCTGTCGGTGCCCTTATGCTCATTCAATGGATTGGAATAGTTAACCTTGGCATAAAAGATTACCTAGCCATCGGTGCCATACTGTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTCAATCAAGATGAAACACCCTTGCTTTACAGCATTGTATTTGGGGAGGGAGTGGTAAATGATGCCACGTCTATTGTGCTTTTCAATTCGGTCCAATCCCTTGACTTCAGCAGCTCCAATTCTATGACAGCCTTGAAATTGTTGGGGACCTTCCTTTACCTCTTCAGCACTAGTACTGCCCTTGGCATAGCAGTTGGCCTTTTAAGTGCTTATATTATGAAAAACCTCTACCTGGGAAGGCATTCTACTGATCGTGAACTTGCACTTATGATGTTGTTGGCATATTTGTCATATATGATCGCTGAGCTTTTGAGTCTCAGTGGGATATTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTACATTAAGCTCAAGGACAACAACCAAGCACGCCTTTGCAACCCTCTCATTCATTGCAGAAACTTTTATATTTATATGTGTTGGCATGGATGCTCTAGACATTGACAAATGGAAAAGCAGTAAAGGCAGTGCAGGAATTTCAGTTGCTGTGAGTTCTACTTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCATACATTAAAAATCGTATCAATACAAGAGAGAATACCAGAATAGAATTTCGTTCACAGTTTATCATATGGTGGGCTGGTCTGATGAGAGGTGCAGTGACTATTGCCCTATCTTATAACCAGTTTGCAGAAGCCAAGAGTACATCATCAACTCAAGACTCTGCATTAATGATCACTTCTTCTATAATCGTGGTCTTGTTCAGCACTGTGGTATTTGGCTCCATTACTAAGCCACTGATAGAGGCTGTGCAATCAAGGCATCCAAAACCAACCAGTTTTGATTCCACTGATAACGTAGAAGATTTGAGATTCCTATTGCTTGAAAACAATGGTCCCATTAACCAAAGCAACAATCTGCAAATTCAAAGGCAAAGTAGGATATGTATGCTATTAAACCATCCAAGCAAAACTGTTCACTACTTTTGGAGGAAATTTGATGACAAGTTTATGAGACCTGTGTTTGGTGGAAGGGGATTTGTGCCTTTTGTTCCTGAGGTAGCAGCAGAGATTTTTTGA 1596 0.4104 MALLLPPLHLTTSYLSTSTIVALCVFFTLLGTCVIIGHLLEENRWANESIIALLLGLCAGTVVLFVTNFKSAKILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTIILLFGVIGTVISFCLISVGALMLIQWIGIVNLGIKDYLAIGAILSATDSVCTLQVLNQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDFSSSNSMTALKLLGTFLYLFSTSTALGIAVGLLSAYIMKNLYLGRHSTDRELALMMLLAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTLSSRTTTKHAFATLSFIAETFIFICVGMDALDIDKWKSSKGSAGISVAVSSTLFALVLIGRAAFVFPIAYIKNRINTRENTRIEFRSQFIIWWAGLMRGAVTIALSYNQFAEAKSTSSTQDSALMITSSIIVVLFSTVVFGSITKPLIEAVQSRHPKPTSFDSTDNVEDLRFLLLENNGPINQSNNLQIQRQSRICMLLNHPSKTVHYFWRKFDDKFMRPVFGGRGFVPFVPEVAAEIF* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1534 531 PANTHER SODIUM/HYDROGEN EXCHANGER 10 526 IPR018422 GO:0006812|GO:0015299|GO:0016021
Vra8g1534 531 Gene3D - 142 194 - -
Vra8g1534 531 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra8g1534 531 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra8g1534 531 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra8g1534 531 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra8g1534 531 Pfam Sodium/hydrogen exchanger family 29 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra8g1534 531 PANTHER SODIUM/HYDROGEN EXCHANGER 10 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1534 Vra-Chr8 32291113 32297977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1534 15 529 Antiporters AT5G27150 61.272 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1534 K14724 - qsu:112009828 754.592