Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1513 ATGAGTGATCAATCCATTCAAATCCAAATGCTCGCTGAAAAATTCCACCGTTTCGTTCTTGACTACGAACTCAAGCAACCGTCGATCACTTCTGAGCCAGATGATGTATCGAAGCAAGTGAACGAGAACTCAGACTCCGTGGACGAAAACAGTATGTCACAGGGAATCCACGAAGTTTCTCCGGATAAAGGTCACACACTTCCTATATTGAAGAAAATACTTGATCTCGACACTAAAATTCAGGATTTGAAGAAGCATCACATATCATTGTCTGATGAAGTTAAGCTCACGATTGAATCTTTTCCGGGCACTGATGTTTTGAAGTCCGTGCAGCTTCTCGGTGCTGAATATGAACTCTTGAAAAGAAAGTACCTGGAGGAGTCCTCTGAGCGAAGGCGGCTTTACAATGAAGTAATTGAACTCAAGGGGAATATCAGAGTTTTCTGCAGATGCCGACCATTAAATGCAAGTGAAATTGCTAATGGGTCTGCTTCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTGCAGAATCTTCTAAAAAGCAATTTAAATTCGACCATGTATTTGGGCCAGAAGATAACCAGGAGGCTGTGTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGCTACAATGTCTGCATTTTTGCCTATGGGCAAACTGGAACTGGGAAAACATTCACTATGGAAGGAACACCAGAACACAGGGGAGTTAACTACCGAACCCTGGAAGAGTTATTTCGGATAACTGAAGAGAGAAATGGCACGATGAAGTATGAATTATCTGTCAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTGTTGGTGGAAAATTCAACTCAACCTACAAAGAAATTGGAGATAAAGCAAGCTGCCGAAGGAACCCAAGATGTCCCTGGACTTATTGAAGCACGTGTTTATGGAACAGAAGACGTGTGGGAAATGCTTAAGACTGGAAATCGAGTCAGATCAGTTGGATCCACCTGCGCTAATGAGCTTAGTAGCCGTTCGCACTGCTTGTTGCGAGTAACTGTAATGGGGGAAAATTTAATTAATGGCCAGAGAACAAAGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGAGTGGGAAAAACTGAAGCTGAGGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCGCTTGGTGATGTTATTTCTGCCCTTGCTTCTAAATCAGCCCACATTCCATACAGGAACTCAAAACTCACTCATATGCTGCAAAGCTCGTTAGGTGGAGACTGCAAAACATTAATGTTTGTGCAGGTAAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCCACCCGCGTCCGTGGAATCGAGGGTGGCCCGGCTCGCAAGCAAGTAGACCACTCTGAGTTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGACGAGAAGGAAACAATTAAATTACAGGATAGCTTGCAAATTGCTCAACTCAGGCTTGCTACAAGAGAACAGCATTGTAGAACCCTTCAAGAAAAGGTTCGGGACCTGGAGAACCAGATCGCCGAAGAAAGAAAGCACAGACTAAAGCAAGAAAGTAGAGCACTTGCTGCTGTTTCGGCTCAACCCTCATTACCATCACAACAGACAACAGCTCAGAAAACAATGACTGACAGGAAGCCACCACTGAATCCTTCCAAACTCAGACAACCACTGAGAAAAATAACCAATTCCATGCCTCCACAGTCTCCTTGGAGATCAAAGAATTACACCACATTCATGAATGGAAAGGAAAACTCTGTGAGAAGGGCTTCAATGGCGACCAATTCCGTGAGGCAAGCTGCGCCATCAACAACAGGGCAGTTCTTTCAGGCAAGGAGGAGGGTCTCCATTGCCGTTAGACCACCACCTTCAACATCAACAACGCAGGTCATTCAGCCAAGGAGGAGGGTCTCCATTGCCACACTACCGCTTCACACAACTTCTAGCATGTCAACTCCACTTCGTACCTCAGCATTCCGAGTTACCGGTGGAAGCAATCAGCAATCACGGATAAGAAGCCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCAATGCCAGAGTTGAGAGAATCAGTCTTGACAACACCAATGTCAGTAAGGAGCAGCAGCAAGTTTATGATGAACAGTCCAACACAGGCAGATTCCAGGATGATGGGGCCCATTAGGAATCAACCTGTTCTTGCTCTACAACGTAAACCTGTGGTCTGGAGTCCTCTTAAGCTAAGAACCATGAACAGAAAGTCATCACTCCTGCCGTATCGCCCAACCCAAATGCAGTAA 2364 0.4454 MSDQSIQIQMLAEKFHRFVLDYELKQPSITSEPDDVSKQVNENSDSVDENSMSQGIHEVSPDKGHTLPILKKILDLDTKIQDLKKHHISLSDEVKLTIESFPGTDVLKSVQLLGAEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNASEIANGSASVVNFESSSDNELQVICAESSKKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERNGTMKYELSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQDVPGLIEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSAADLGETLCSLNFATRVRGIEGGPARKQVDHSELFKYKQMVEKLKQDEKETIKLQDSLQIAQLRLATREQHCRTLQEKVRDLENQIAEERKHRLKQESRALAAVSAQPSLPSQQTTAQKTMTDRKPPLNPSKLRQPLRKITNSMPPQSPWRSKNYTTFMNGKENSVRRASMATNSVRQAAPSTTGQFFQARRRVSIAVRPPPSTSTTQVIQPRRRVSIATLPLHTTSSMSTPLRTSAFRVTGGSNQQSRIRSQRKDRYSSLFAPMPELRESVLTTPMSVRSSSKFMMNSPTQADSRMMGPIRNQPVLALQRKPVVWSPLKLRTMNRKSSLLPYRPTQMQ* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1513 787 MobiDBLite consensus disorder prediction 550 573 - -
Vra8g1513 787 PANTHER KINESIN-LIKE PROTEIN KIN-14S 82 776 - -
Vra8g1513 787 CDD KISc_C_terminal 142 469 - -
Vra8g1513 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 496 IPR027417 -
Vra8g1513 787 Gene3D Kinesin motor domain 139 510 IPR036961 -
Vra8g1513 787 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 MobiDBLite consensus disorder prediction 30 60 - -
Vra8g1513 787 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra8g1513 787 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra8g1513 787 MobiDBLite consensus disorder prediction 43 57 - -
Vra8g1513 787 PANTHER KINESIN-RELATED 82 776 IPR027640 GO:0003777|GO:0007018
Vra8g1513 787 MobiDBLite consensus disorder prediction 550 581 - -
Vra8g1513 787 Coils Coil 513 547 - -
Vra8g1513 787 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1513 Vra-Chr8 32078640 32082904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1513 110 494 Calmodulin-binding Proteins AT5G65930 41.162 4.90e-80 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1513 K10406 - gmx:100788477 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1513 8 32078640 32082904 Vra8g1513 8 32078640 32082904 ECH