Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1506 ATGGCTGATTTTATGACCTCTACTCATAGAGTGAAGTGGATTTTTACACCTCAACAGCTGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACAAATTCTAGAGAAGTATGGTGCAACTCTAATGGAAGTAGATGTTGATGGATCATTGTCATATCCTGAAGCCCAGATGACTGCAAAAGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAAGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTAATTGTGTATGCACCATATCGCTCGGTTGAAGGTTTTATAATTGATATGGAGGAATTTTGCAATAGTGGTGATGATCAGCTTCAAATGCTTAAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGTTATCTTGGGAGCATTTTTCAAGGTCAGAATTCCATGCATACAATGGCCGAGCTTGCTGAATCACTGCATGCAATTGACTCCTGTGTTAAAAAATACAAAATTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAGGAGCTCAAACGAGGCACAAAATATGGCATCTCTTGCCTAG 1008 0.3968 MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKQILEKYGATLMEVDVDGSLSYPEAQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNSGDDQLQMLKTLQDTARLEVDKMMLTDAPLLFPPGQLALAALGNSNALHNVIDFDSYLGSIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKRSSNEAQNMASLA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1506 335 Gene3D - 63 175 - -
Vra8g1506 335 SMART cyclin_7 87 168 IPR013763 -
Vra8g1506 335 Gene3D - 177 282 - -
Vra8g1506 335 CDD CYCLIN 82 148 IPR013763 -
Vra8g1506 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Vra8g1506 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Vra8g1506 335 MobiDBLite consensus disorder prediction 301 335 - -
Vra8g1506 335 Pfam Cyclin, N-terminal domain 82 174 IPR006671 -
Vra8g1506 335 PANTHER CYCLIN-H 1 330 - -
Vra8g1506 335 PANTHER CYCLIN 1 330 IPR043198 GO:0006357|GO:0016538
Vra8g1506 335 Pfam Cyclin C-terminal domain 179 280 IPR031658 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1506 1 280 Core Cell Cycle Gene Families AT5G27620 64.286 6.11e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1506 K06634 - gmx:100800023 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1506 8 32011397 32017281 Vra8g1506 8 32011397 32017281 ECH