Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1494 ATGCATTCCTGTCTTTATGACCTTTTAGCTCGGACAAGGAAAAAACAAATGGCTTCTGCTTCTGACCATTTTTCTATCTTCTTCATCATCACCCTTTTCCTCCTCCTGTCATCACACATTTTTACTGTCGCGGATTCTCTTTTCAATGCAGTCGGAAGCTTCCAACTTCATGCCCTACCAGATATGCATTTCATTGAAGGGAATGATGAAAACCAGATTAAGAAAATCTCAGGACTCGATGAGAATGAAAAGAAGCAAGCTTTCATAGTGGACAAGTTTAGATCCTTGCTTGGACTAAAGACTTTCCACACCAAAGTACCACCTAATGGTGATTTCGACTTTCTCTCTCCCTCACCTTCTCCATCTCCCCTCATTGAAGATGCTCAGGCTTCAGCCCCTTCTCCTTCTCCACTTCCACACGTGCACTCTCATTCCCATCATCCACGGCAACGCACGAATCCACCGCTTCACCAAACTCATCATGAAGATAGAGGCAGGGCCAAAATAATACTAATAGCTGTTCTTGTATCTGCTGGTGTTGCTACATTGATTGGTGCTTGTGGATTATTCTTGTTGTGGAGGAAATTCTCAAGTCACAAAAAGAAACCCAAAAGGACAATGCCACTCTGTAGCAAGAGCAAGGGAAGTGGAGGTTCTTATCAAAGTTCATCCAGCAAGGTGAGTTTAAACTCTGGACTAGATCTGTTTTATCTTAATGCTTTGGGCGAGGACGTTGAGCAACACGGTTGCACCTTGAAAAAAACTTGCAAGGATGGTGTAGAGTATGATAATGTTAGCGGTTCTTTCACCAAGGAAATTGCATCTGTTCATGAAGATGCAGACTCAGAAAAGGGTGAAACTGAATCTGATGGCGACAACTCTTCTGGGGATAAGATTATCCCTGAAGATTGTCATTCTTCAGACGATGAAAGCTTCCATTCCTTCGTTGATTCTCATTCCAATAATAGACTTTCCAATGCTTCACCTTGTAATCTTAGTGACACAAACTCTCTGTCACGTCAAAATTCAAGTTCATTACTGAACCAATTTCTTAGCTCTCCATCACACAACTCGATCCCAAATACACAATCTCACCAACCATCAAGTAGTACAAAACATGAGGAGCAAGAGACTGAGACCACTCACCAATGTTCAAAAACATTTACTCCCCCTCCACCACCACCACCACCACCTCCTCCTCCTCCACCATTGCAAATGCCATTGTTTTCTTTGCATTCTCTCACTTCTTCCTCTAGAGTCTCTTCTCATTCCCCACTTTCTTTGACATCTAACAATTTATCATCTCCGGTAAATTCAGACACTTTCTCAGGTTCAAATCAAAGTCCGGAAAAGGAGTTGCCTTCCACACCTGAACCTTACCCTACACATTCTCCTCCCAACATCCCCCCACCACCATGCCCACCTCCATTTCTCAAAGGCAATAGTAACAATGCCAAAACCCCACCTCCTCCTCCACCGTCTCAACTCCCCCAATTCACCCCACTTGGTAAAGATGGTGCACCATTGCCAAAACTAAAACCACTTCACTGGGACAAAGTAAGAGCCGCACCAAATCGCACAATGGTTTGGGATAAACTGCGATCGAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCTCTTTTTGGTTACAACTTGCAAAATTCAATTAAGAACGACGAAACAAAGAGTAAAACCCCGTCACCAGGCAAGCACGTACTTGAGCCAAAACGCCTGCAGAACATAACTATACTCTCAAAAGCTCTGAATGCGACAGCAGAGCATGTCTGCGAGGCCTTAATGCAAGGGAAGGGGCTGTCTTTACCCCAACTAGAAGCACTAGTGAAGATGGTACCCACCAAGGAAGAAGAATCCAAGCTCTTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAGGTTCGTGAGAGCAATGCTTGATGTGCCATATGCCTTTCAAAGAGTAGAAGGCATGCTTTTCAGAGAGACGTTTGACGATGAAGTAGTTCACCTCAGGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTTCGATCAAGCAGGTTATTCTTGAAGCTACTAGAAGCAGTGCTCAAAACAGGAAACCGTATGAACGTTGGAACAATCAGAGGAGGTGCTAGAGCATTTAAACTAGATGCCCTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGGAAAACCACATTGCTCCATTTTGTTGTTCAGGAGATTGTTCGTTCGGAAGGAGTAAGAGTTTCAGATAGCATTATGGGAAAAATCAGCCAGAGAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTACAAAAGAATGGGATTAGAACTTGTTTCTGGTCTCAGCACTGAGTTATACAACGTGAAGAAAACAGCCACAATAGACTTGGATGTTCTTGCAAGCTCTGTGTCGAATCTATCAGAAGGTATGAAAAAGCTGCAACATATAGTGGAAAAGGAACTGCATAAAGATGAGAGAAGCATTAACTTTGTACAGTGTATGAAGTCATTTCTGAAGTATGCTGATGCAAACTTGAAAGAGTTACGAGGAGATGAAAATAAAGTATTGGTACGTGTGAAAGAAATCACGGAATATTTTCATGGGGATGTGAGCAAAGAAGATGCAAATCCTTTGAGGATATTTGTGATTGTTAGAGATTTTCTGGGGATGTTAGATAATGTGTGTAAAGAACTTAGAAAGTCTAAAGCTCCACGTAGTCCAAATCCTCTTGCAATGCTCCCTTTAGATAGATCATAG 2784 0.4264 MHSCLYDLLARTRKKQMASASDHFSIFFIITLFLLLSSHIFTVADSLFNAVGSFQLHALPDMHFIEGNDENQIKKISGLDENEKKQAFIVDKFRSLLGLKTFHTKVPPNGDFDFLSPSPSPSPLIEDAQASAPSPSPLPHVHSHSHHPRQRTNPPLHQTHHEDRGRAKIILIAVLVSAGVATLIGACGLFLLWRKFSSHKKKPKRTMPLCSKSKGSGGSYQSSSSKVSLNSGLDLFYLNALGEDVEQHGCTLKKTCKDGVEYDNVSGSFTKEIASVHEDADSEKGETESDGDNSSGDKIIPEDCHSSDDESFHSFVDSHSNNRLSNASPCNLSDTNSLSRQNSSSLLNQFLSSPSHNSIPNTQSHQPSSSTKHEEQETETTHQCSKTFTPPPPPPPPPPPPPPLQMPLFSLHSLTSSSRVSSHSPLSLTSNNLSSPVNSDTFSGSNQSPEKELPSTPEPYPTHSPPNIPPPPCPPPFLKGNSNNAKTPPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKSKTPSPGKHVLEPKRLQNITILSKALNATAEHVCEALMQGKGLSLPQLEALVKMVPTKEEESKLFNYKGDINELGSAERFVRAMLDVPYAFQRVEGMLFRETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGVRVSDSIMGKISQRSKNRTEEEKEEDYKRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMKKLQHIVEKELHKDERSINFVQCMKSFLKYADANLKELRGDENKVLVRVKEITEYFHGDVSKEDANPLRIFVIVRDFLGMLDNVCKELRKSKAPRSPNPLAMLPLDRS* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1494 927 PANTHER FORMIN-LIKE PROTEIN 387 921 - -
Vra8g1494 927 PANTHER FORMIN-LIKE PROTEIN 71 398 - -
Vra8g1494 927 Pfam Formin Homology 2 Domain 506 900 IPR015425 -
Vra8g1494 927 SMART it6_source 502 915 IPR015425 -
Vra8g1494 927 MobiDBLite consensus disorder prediction 276 513 - -
Vra8g1494 927 MobiDBLite consensus disorder prediction 276 316 - -
Vra8g1494 927 MobiDBLite consensus disorder prediction 454 478 - -
Vra8g1494 927 PANTHER FORMIN-RELATED 71 398 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra8g1494 927 PANTHER FORMIN-RELATED 387 921 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra8g1494 927 MobiDBLite consensus disorder prediction 317 369 - -
Vra8g1494 927 MobiDBLite consensus disorder prediction 203 224 - -
Vra8g1494 927 Gene3D Formin, FH2 domain 525 916 IPR042201 -
Vra8g1494 927 MobiDBLite consensus disorder prediction 123 162 - -
Vra8g1494 927 MobiDBLite consensus disorder prediction 387 407 - -
Vra8g1494 927 SUPERFAMILY Formin homology 2 domain (FH2 domain) 515 911 - -
Vra8g1494 927 ProSiteProfiles Formin homology-2 (FH2) domain profile. 502 926 IPR015425 -
Vra8g1494 927 MobiDBLite consensus disorder prediction 409 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1494 Vra-Chr8 31870439 31874302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1494 486 920 FH2 protein (formin) Gene Family AT3G05470 74.371 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1494 - - gmx:100793761 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0546 10 11345539 11348594 Vra8g1494 8 31870439 31874302 PCT