Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1483 ATGGGGATCGATCTGAAGGCCGGAGGTAAGAGCAAAAAGACGAAAAGAACAGCACCAAAGTCCAATGATATCTATCTCAAGCTCTTGGTTAAGCTTTATCGCTTCCTTGACCGGAGAACTAGCAGCAATTTCAATGCTGTTATACTCAAGCGATTGTTCATGAGCAAGGTTAACAAGCCCCCACTTTCTTTGTCAAGGTTGATTAAGTATACCAAGGGAAAGGAAGATAGGATTGCTGTTGTGGTGGGGACTGTAACTGATGATATCCGTGTTTATGAAGTTCCACCCTTGAAAGTTACAGCACTCAGGTTTACTGAGACTGCTCGTGCAAGAATTGAAAAGGCTGGCGGTGAATGTTTGACATTTGATCAGTTGGCTCTTAGGGCACCTCTTGGAGAGAACACGGTCCTTCTTAGAGGCCCAAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTTCCTCACAGCCACACCAAACCTTATGTTCGATCTAAGGGTAGGAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCCGAGGATTTAGGGTGTGA 564 0.4628 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLDRRTSSNFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEDRIAVVVGTVTDDIRVYEVPPLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1483 187 MobiDBLite consensus disorder prediction 151 187 - -
Vra8g1483 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Vra8g1483 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Vra8g1483 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Vra8g1483 187 Gene3D - 1 187 - -
Vra8g1483 187 MobiDBLite consensus disorder prediction 164 187 - -
Vra8g1483 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1483 Vra-Chr8 31774716 31776985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1483 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 78.495 7.98e-103 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1483 K02883 - gmx:100791657 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0531 10 11203142 11205084 Vra8g1483 8 31774716 31776985 PCT