Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1474 ATGGGGCACTTTTCATCTGCGTTCAATAGGTTGGCAAAGTCCTTTGCAACGAAGAGAAGTGGGAGTTCTGATGGATGCAACGGAAGAGAAGCTGCGGAAACAATGGCAAAGGAAGCTAAAAAAAATCACTTCATGTTGCATAGCTCCGGCACCATTAATGTTGACGGTTCAAACAACTTTGCCTCGCTTTTCTCCAAAAAAGGAAAGAAAGGAGTCAATCAGGATTGCTGCGTAGTTTGGGAAGAATTTGGGTGCCAAGAGGACATGATTTTCTGTGGGATTTTTGACGGGCACGGGCCATGGGGTCACTTTGTGGCCAAGAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCCAGATGTTGATGTTGATATTACGGCAGAGAAAAAGCAACACCGGTTCAATATATGGAAGCACTCTTACTTGAAGACCTGTGCTGCCATTGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCTCTGTCCATTGTTAGACAGGGTGAATTAATTGTGATTGCAAACGTTGGTGACTCTCGTGCCGTTTTAGCCACAGCATCGGATGATGGAAGTTTGGTAGCAGTTCAGTTGACAGTAGATTTCAAGCCGAGTTTACCTCAGGAAGCGGAGAGAATAGAGGAGTGCAAAGGACGAGTTTTCTGCTTGGAAGACGAGCCTGGGGTGTACAGGGTGTGGTTACCGGATGAGGAGTCACCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCGTCAAAGAGTATGGTCTTATTTCAGTGCCTGAAGTAACACACAGGAACATAACCAGCAAAGACCAGTTTGTCGTACTAGCCACTGATGGGGTGTGGGATGTAATCTCCAATCAAGAAGCAGTGGATATTGTGTGTTCAACAGAAGACAGAACAGAGTGTGCGAAACATTTGGTGGAGTGTGCGATGCGTGCATGGAAACGCAAGAGGAGGGGCATTGCAATGGACGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCGTCACTTCACGAAGTTCATGCCACCCTAGAATAG 1107 0.4598 MGHFSSAFNRLAKSFATKRSGSSDGCNGREAAETMAKEAKKNHFMLHSSGTINVDGSNNFASLFSKKGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLSQTSLDPDVDVDITAEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATASDDGSLVAVQLTVDFKPSLPQEAERIEECKGRVFCLEDEPGVYRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTHRNITSKDQFVVLATDGVWDVISNQEAVDIVCSTEDRTECAKHLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLHEVHATLE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1474 368 Pfam Protein phosphatase 2C 84 333 IPR001932 -
Vra8g1474 368 PANTHER ALPHABET, ISOFORM E-RELATED 1 362 - -
Vra8g1474 368 SMART PP2C_4 51 352 IPR001932 -
Vra8g1474 368 Gene3D - 55 356 IPR036457 -
Vra8g1474 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Vra8g1474 368 SUPERFAMILY PP2C-like 59 356 IPR036457 -
Vra8g1474 368 CDD PP2Cc 59 354 IPR001932 -
Vra8g1474 368 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1474 Vra-Chr8 31686159 31689101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1474 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.112 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1474 - - gmx:100793051 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0906 3 9097744 9101187 Vra8g1474 8 31686159 31689101 PCT
Vra10g0478 10 10674369 10677829 Vra8g1474 8 31686159 31689101 PCT