Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g1468 | ATGGCGCCAGAGCTAGCCTTGCCATTCTCTGTTGTATCTGTGGTCGAAGATGTTCTTCAGACGCACGGAAGCTGTTTAAGCGACATTCACTTGGCATCAAGGATGGCAGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCTGGGTGGCTAAGAAAGACAGTTGGAGTTGTTGGAGGGAAAGACATTCCAGATGAGCCTACTGAAGAAGATTTCAGGATTGCATTACGAAGTGGCATTGTCCTTTGCAATGCTCTTAACAAAATTCAACCCGGAGCAGTGCCCAAGGTAGTTGAAGTCCCCTGCGATAGTGTTGTCATTCCTGATGGGGCACCTCTGTCTACTTACCAATACTTTGAAAATGTAAGGAATTTTCTGGTAACTATGGAAGAAATGGGGCTTCCCACCTTTGAAGTGTCCGATATAGAACAGGGAGGAAAATCTTCGAGGATAGTGAATTGTGTTTTAGCACTTAAGTCTTACAGTGAATGGAAACAGGGAGGAAAAAATGGGTCATGGAAATATGGTGGGAATCCAAAGCCACCTACCAATGCTAAACCAGCTATTATGATGAAAGTCTCAGAACCATTCATGAGGTCTTTGTCAAAGGGTAGTAGGTTAGGCGATAAAGATGGGTTACTGAATGATATTTCTACAAACAGTGAAGGGGGTTCTATACCCTCCCTGAATTTACTAATTCGTGAAATTTTATCTGACAAGAAGCTAGAAGAAATTCCCACTGTGGTGGAGTCTCTACTTAGCAGAGTCATGGAGGAGTTTGAAAAACGCTTGCTAATCCAACAAGAAATGTTCAAAACAACTCAAAACCATAAGGCAGTGCCTGAAGCAGAGGATTCCAATGTGAAATCTGCTTGTAATGGTGAAGAGATGGAACAAGATAAAGATGTGGTGGTTAAACACAAGGAATTTGTTGATGTGAAGTACAATGTCGATGAAGAACCAAACAGCCAGTATTTTAAGCAGCAAGAGTTATTTCAGCAGCAAAACGAGAACGTCCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATGCAGGTTCTGCAAAATAAATACCAGGAGGATATGATCTATCTAAGTAAACACCTGCATGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAATTTTTGAAGAAAACCGCAAGCTTTATAATCAATTGCAAGACCTTAAAGGAAATATTAGGGTGTACTGTAGAGTTCGTCCCTCAAAAGGTGCCCAACCAAATCATCATTGCTCTGTCAGTAACATAGATGAAGGAAGTATATCACTCATAGTGCCATCCAAAAACGGGAAAGACGGGAAGAAGACATTTAATTTCAACAGAGTCTTTGGTCCTTCTTCAACCCAAGCGGAGGTTTTCTCAGATACAAAACCACTTATTCGTTCGGTTCTTGATGGCTACAACGTGTGTATATTTGCTTATGGTCAGACAGGATCAGGAAAAACACACACTATGTCTGGACCAGACAATTATACTGAGGAAACAGTGGGTGTCAACTTCCGGGCTCTGAAAGATCTTTTCCAAATCTCGGAGCAGAGAAAAGACACCATTCACTATGATATATCTGTTCAAATGCTTGAGATTTACAATGAACAAGTCAGAGATCTATTATCGACAGACAGTACTCACAAAAGATATCCTTTTTTAGAAATCCGCAACAGTTCTCATAATGGCATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTTCCGATGTCTTAAAGTTAATGAACTTGGGACAAAATAACCGGGCAGTTAGTTCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCACGGAAGAGAGCTAGCATCAGGGAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCGCTTTCTGCATTAGGAGATGTAATTGCTTCTCTTGCCCAAAAGCAATCACACGTTCCTTATAGGAACAGCAAACTTACTCAGTTACTTCAAGATTCTCTCGGAGGCCAAGCAAAGACACTTATGTTTGTTCATGTTAGTCCCGAGCCAGATGCCATTGGAGAAACAATCAGTACATTGAAGTTCGCAGAAAGGGTATCCACTGTTGAACTTGGTGCTGCTCGAGTTAACAAAGATAGTTCAGAGGTCAAAGAGCTTAAAGAACAGATTGCGATTCTAAAGGCAACCTCCGCCAGGAAGGATGGAGAATCGGAACAATTTCATCAGTCTGCAAATAGCATTTCTGAAACTCCAAAGTCCAAATCTCTATTGTCTTCCACTGCACGGTCTCCTACTTCGTCTCATGGAAATCGTAAGCCACCAAGGGAAGATTCCAGTAACACCGTTGAGGACAAGAAAAAGGGTAGCCCGAAGCTCACGAAAAGAGGAAGCCTTGACCCCTTGGACGTTCGTAGGAACTCACCACCTTGGCCACATCATGCAGAGGAAAACGGAAATGAGGATGATAAAGAATTGGTTTCTGGGGATTGTCTTGGTAAGCATACAAAAAGGAATGGCCAAAACAACCTCGTGGGAGACTGTGATACAGAAAGCAAGCGGTCATCTTCTCCAACGCTAAGTCCCTTGGATATTTTTGACCCTTCCAAAATATGCACGGAGGTGACCACCATAAATGACTGTGATGAATTTGAGTTAGCAACCAGTGAAAGCTCAGAATCAGACAAGAGTTGGGAATCATCACATGTACACGTACCAAAAGCAACCACTCTTTCCAACGGAGTAGCAGCTAAAACAAAAAAATCACCACATTCAAGACAAGCCAAGAATCAAGAAAACAGGAGTAAGATCCCCTCATTGTCTCCTTCATCATCAAGGAGACAACCGACGGTAGTTAGTCAACAGAAAAAGCATCTAGATGCAAAAAGAAGAACTGGAAATGCCAAATGA | 2988 | 0.4217 | MAPELALPFSVVSVVEDVLQTHGSCLSDIHLASRMAEEASSRRNEAAGWLRKTVGVVGGKDIPDEPTEEDFRIALRSGIVLCNALNKIQPGAVPKVVEVPCDSVVIPDGAPLSTYQYFENVRNFLVTMEEMGLPTFEVSDIEQGGKSSRIVNCVLALKSYSEWKQGGKNGSWKYGGNPKPPTNAKPAIMMKVSEPFMRSLSKGSRLGDKDGLLNDISTNSEGGSIPSLNLLIREILSDKKLEEIPTVVESLLSRVMEEFEKRLLIQQEMFKTTQNHKAVPEAEDSNVKSACNGEEMEQDKDVVVKHKEFVDVKYNVDEEPNSQYFKQQELFQQQNENVQELKMMVHQTKTGMQVLQNKYQEDMIYLSKHLHGLASAASGYQKIFEENRKLYNQLQDLKGNIRVYCRVRPSKGAQPNHHCSVSNIDEGSISLIVPSKNGKDGKKTFNFNRVFGPSSTQAEVFSDTKPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPDNYTEETVGVNFRALKDLFQISEQRKDTIHYDISVQMLEIYNEQVRDLLSTDSTHKRYPFLEIRNSSHNGINVPDANLVPVSSTSDVLKLMNLGQNNRAVSSTAMNDRSSRSHSCLTVHVHGRELASGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPEPDAIGETISTLKFAERVSTVELGAARVNKDSSEVKELKEQIAILKATSARKDGESEQFHQSANSISETPKSKSLLSSTARSPTSSHGNRKPPREDSSNTVEDKKKGSPKLTKRGSLDPLDVRRNSPPWPHHAEENGNEDDKELVSGDCLGKHTKRNGQNNLVGDCDTESKRSSSPTLSPLDIFDPSKICTEVTTINDCDEFELATSESSESDKSWESSHVHVPKATTLSNGVAAKTKKSPHSRQAKNQENRSKIPSLSPSSSRRQPTVVSQQKKHLDAKRRTGNAK* | 996 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g1468 | 995 | PANTHER | KINESIN-LIKE PROTEIN KIN-14H | 6 | 990 | - | - | |
Vra8g1468 | 995 | ProSiteProfiles | Calponin homology (CH) domain profile. | 40 | 162 | IPR001715 | GO:0005515 | |
Vra8g1468 | 995 | SMART | kinesin_4 | 398 | 737 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | Gene3D | Kinesin motor domain | 342 | 731 | IPR036961 | - | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 758 | 894 | - | - | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 912 | 995 | - | - | |
Vra8g1468 | 995 | Coils | Coil | 736 | 756 | - | - | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 767 | 795 | - | - | |
Vra8g1468 | 995 | CDD | KISc_C_terminal | 398 | 731 | - | - | |
Vra8g1468 | 995 | PRINTS | Kinesin heavy chain signature | 474 | 495 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | PRINTS | Kinesin heavy chain signature | 599 | 616 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | PRINTS | Kinesin heavy chain signature | 630 | 648 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | PRINTS | Kinesin heavy chain signature | 679 | 700 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 958 | 981 | - | - | |
Vra8g1468 | 995 | SMART | ch_5 | 42 | 160 | IPR001715 | GO:0005515 | |
Vra8g1468 | 995 | Gene3D | - | 35 | 175 | IPR036872 | - | |
Vra8g1468 | 995 | SUPERFAMILY | Calponin-homology domain, CH-domain | 45 | 175 | IPR036872 | - | |
Vra8g1468 | 995 | Pfam | Calponin homology (CH) domain | 41 | 162 | IPR001715 | GO:0005515 | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 929 | 946 | - | - | |
Vra8g1468 | 995 | Pfam | Kinesin motor domain | 406 | 728 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | Coils | Coil | 380 | 400 | - | - | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 861 | 889 | - | - | |
Vra8g1468 | 995 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 400 | 762 | IPR027417 | - | |
Vra8g1468 | 995 | ProSiteProfiles | Kinesin motor domain profile. | 400 | 729 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vra8g1468 | 995 | MobiDBLite | consensus disorder prediction | 796 | 858 | - | - | |
Vra8g1468 | 995 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 6 | 990 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g1468 | Vra-Chr8 | 31610640 | 31617008 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g1468 | 388 | 765 | Calmodulin-binding Proteins | AT5G65930 | 42.368 | 1.29e-78 | 278 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g1468 | K10406 | - | gmx:100808197 | 1446.41 |