Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1455 ATGATGGACTTTGTTTCTTCTTCAGATTTGGGTTCTTCAGAGAAAGTAACTGTCAACAGGATCTCATTGTTTCATACGGCCAACATTATAATGGAGATTCACAGAAGACGTTTCAAGGGAACCTTTCTTAGCTTCTTTGACTGGAATGGTAAATATCAAAAGAAGCACCTTTCTCACGATCCTAAGTTGCCTGAAATTTCAAAGCAAGGAAAGGAAAACGTGGACAATTTGCCAAAGTCAGAGGTCGATAAGATGGAAATGAATGACAATGGAGGAAATCCTAGTAACAATGCAAGTTCTGATTTTGATTGTGCCATATCAATTAGTAGTGATGAAGGGTGTCAGACTAAAGCCCCGGGGTTAGTAGCCAGACTCATGGGTTTGGATTCACTGCCAGTTTCAAATGTCTCTGAGCTCTCTTCATTATCCACTTCCTTATATGGCTCCAACTCTCTTGGATCTTCTCGTACTCCTGATGAGGATGTTCTTCACTCAACGGTTGACTATTGTTGTAATGTTGATTCGATAAACATGGGACTTAATTCGGTGAAGTCTTCTTGGAGAGTCATGGAACCAAAAGAGAGAAATCCAGCCATGAAAAGATTTCAGACTGAAATGTTACCTCCAAGGTCTGCCAAAACCATTCCAGTTACTCACCACAAACTTTTGTCTCAACCTAAGCATGCAGCTCAAATTATGGAGGCAGCTGCCAAGATAATTGAGGTAAGTCCCCAGCCATGTAAGAGGAACAGAATGTCTTCTGCTGGACCTTCATCTGTACCCTTAAGAATTCTTGAGCTGAAAGAGAAATTGGAAGCTTCCCAACATGAGTCCAAATTCACAGGTAAGTACACTGCTAACCCTCTGAATGGCAAGCCTGGTGAGAGGAGAAATAGTTTATGTAAATCTACTCCAAGTTCACCAGGTTCAAGAGATTCAGAAAAAAACAGTTCTTGCCGGTTGTCAAGCAAAAGAAAATCTGCTTCACTTGCAATTCCATCTAGAACCAATGTTCAGAGCTGTGATGAATTGACTTTGAATGGTAATAGGGGATGTGTGAAGCAGAAGGAACATAATGATATCAAATCAAACCAGTTGTCTCGGAGCCAGAAGAAACGAAGCACAGACCGAGCCAGAGTCATTCAGCAGAAAGCTTGTAATGGCCAGAATAGTAATGTGCTTGGGAAGAATAACCAAAAACTGTGTAGTGAAACCACCAAAGGTAACCCGACTTCCAAGGCATACTCGCATAAACCAACACAAAATTGGTCTCCAGAAAGTTCTACTAGAGCAAAGAAGACCACAAAAAGGGGTGTTGTAAAAACCAACACCGAGCCCAAAGGGTCAGACACAAGGGTAACAGGTGCTACCAAATCAGTTTCCAAAAGAAAGAGCATTTCCCAAAAGAAAAACTATATGAATAGGGTTGTTCACAATGAGGCAAGAGGCACTGATACTGCGGCTAATAGTTATGAAAACAAGTCTATAAAATGCAATATTACAACTGACGGAAGTATTAATCAGGATGCATTTAGTATGAAAGGAAGCAATGGTGTGATTTCATTTATATTTACATCTCCTTTGAGAAGAAAAAGGCCTGAGTTACAGTCCTCCATTGAGGAAATGGTGGAAACAAGGAACAAAACTGATGTCAATTCTTGTAGCAATAATATGATCAATCCCAGAAAATCATCATTATCTCCTCCCAGGTTACATGTAATAGATGGTGAGGCTTTAAGTGTCCTTTTGGAGAGAAAGCTGCAAGAATTGACATCTAGAATTAACCCAACTCAATGCTCTGTGATGAAAGAATGGTCTTCTGCTGGTTTGGAAGACAGAAGTTTTCACCCCAACCTGGTTAGTAATAAATTGGACAGCAGGCATGACAATTGTTTGTCAAATGATAGCATGGTGCTTAGTATGAATCAGCAACCACAGACATCAGAATCAATAGAAGGGCCTAGCTGCAGCAGCAACAGCGAAAGCAGAAATGAAAGTTACTTAGATAGTGCATATGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAGCTATCTGATTTTTCTCCAATGAATGAATCTCTGCCACTTGAAAACGAGGCCGAATGGTCTGAGCAAAGCTCTTGCATAGTGATGGGAGAGGACATGGTTGCCATTGAACAATCAAGTATAATGTCAAATTCAGTAGAGTTTACAAGATTATCTGGGAACGTGGAATTTGATTACATAAAGGATATACTCTACAGTGCAGAGCTGATGACAGAAAAATTTTTGATGGGTGAGACAGATAAGATCATAATGCCAAATCTCTTTGATCTGTTGGAGACTAAGAGCACTGTGGCAGAAAGCTATGAAGAGTACTCTAAGATCGAGAGAAAGGTTATATTTGACACAGTGAGTGAATGCTTAGAGTTAAGATGTAGAAAAGTTTTTGTTGGAAGCTGCAAAGCAATGCCTAAATGGATGGCTTCAGTTCAGAAGAAGAGCTCTTTAGCTGAAGATTTGTACAAGGAAATGTTGAACCTTAGGAGCATGGAAGAATCAGTGGTGGAGGAACTAGTCTACAAGGACATGAGTACTCCATCGGGTACATGGCTTGAGTTTGACACTGAAGCATTTGAAGAAGGTTTAGAACTTGAGTTTGATGTTGTCACATGTTTGATTAACGAATTGGTTTCTGATTTGTTGCAGGTTTTTTAA 2700 0.4007 MMDFVSSSDLGSSEKVTVNRISLFHTANIIMEIHRRRFKGTFLSFFDWNGKYQKKHLSHDPKLPEISKQGKENVDNLPKSEVDKMEMNDNGGNPSNNASSDFDCAISISSDEGCQTKAPGLVARLMGLDSLPVSNVSELSSLSTSLYGSNSLGSSRTPDEDVLHSTVDYCCNVDSINMGLNSVKSSWRVMEPKERNPAMKRFQTEMLPPRSAKTIPVTHHKLLSQPKHAAQIMEAAAKIIEVSPQPCKRNRMSSAGPSSVPLRILELKEKLEASQHESKFTGKYTANPLNGKPGERRNSLCKSTPSSPGSRDSEKNSSCRLSSKRKSASLAIPSRTNVQSCDELTLNGNRGCVKQKEHNDIKSNQLSRSQKKRSTDRARVIQQKACNGQNSNVLGKNNQKLCSETTKGNPTSKAYSHKPTQNWSPESSTRAKKTTKRGVVKTNTEPKGSDTRVTGATKSVSKRKSISQKKNYMNRVVHNEARGTDTAANSYENKSIKCNITTDGSINQDAFSMKGSNGVISFIFTSPLRRKRPELQSSIEEMVETRNKTDVNSCSNNMINPRKSSLSPPRLHVIDGEALSVLLERKLQELTSRINPTQCSVMKEWSSAGLEDRSFHPNLVSNKLDSRHDNCLSNDSMVLSMNQQPQTSESIEGPSCSSNSESRNESYLDSAYGSTVYSSMQDEELSDFSPMNESLPLENEAEWSEQSSCIVMGEDMVAIEQSSIMSNSVEFTRLSGNVEFDYIKDILYSAELMTEKFLMGETDKIIMPNLFDLLETKSTVAESYEEYSKIERKVIFDTVSECLELRCRKVFVGSCKAMPKWMASVQKKSSLAEDLYKEMLNLRSMEESVVEELVYKDMSTPSGTWLEFDTEAFEEGLELEFDVVTCLINELVSDLLQVF* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1455 899 PANTHER DUF4378 DOMAIN PROTEIN 31 898 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 547 566 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 273 331 - -
Vra8g1455 899 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 31 898 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 57 76 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 380 429 - -
Vra8g1455 899 Pfam Domain of unknown function (DUF4378) 739 890 IPR025486 -
Vra8g1455 899 MobiDBLite consensus disorder prediction 441 462 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 548 564 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 355 379 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 641 665 - -
Vra8g1455 899 Pfam DUF761-associated sequence motif 110 137 IPR032795 -
Vra8g1455 899 MobiDBLite consensus disorder prediction 355 467 - -
Vra8g1455 899 MobiDBLite consensus disorder prediction 297 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1455 Vra-Chr8 31475627 31479711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1455 33 896 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.303 1.17e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1455 - - vra:106771019 1728.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0895 3 9003338 9007873 Vra8g1455 8 31475627 31479711 PCT