Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1428 ATGGGAAACCTTTTCTGGCCTGCCATTGTTGCAGCACTTGTTTTTGGCTTCTGGGTTGATGCCTTTACAGCCTATAAATATCATCACTTCAATGGAACCGAGTTCTCTTTGTTGGAGGCTCAAGAACAAGCATTTTCGTCCCTCACTGGGAGGTCTCCTCTTATGGTAGGACTCACACTCATTCCAAGTGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTACATCGAGGATATGGATCAGGAGCTAACAGCTGGATTGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAAATCATGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAAGATTCATGGAGAAAGAGATACCATTTACAGGAATATTAAGCAATAGTGCTGAAGATAATCCAGATTTTTTCAACTGGAATAGAGTGAAAATTCGTTATTGTGATGGTGCGTCGTTTGCCGGGGATAGTGAACATAAGGCTGCTCAACTGCAATTTAGAGGACAACGTATATGGTTGGCTGCAGTGGAAGATTTGATGTCAAAGGGAATGAGATTTGCCAAGCAGGCTCTGCTTTCTGGATGCTCCGCTGGTGGTCTGGCTACTATTATACATTGTGATGAATTTCGAGGGTTTTTTCCACACACTACCAAAGTGAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGCGATTGACGTGTCTAGGGGACATACCATCAGGAATCTTTTCAGTGGTGTCGTAGGACTGCAGGGAGTGCAGAAGAATCTGCCTCGCACTTGTACCAATCACCTCGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGCAAGTATTAGAACCCCGCTATTCATTCTTAATACGGCTTATGACTCATGGCAGATACAATCAAGCTTAGCTCCTTCATCGGCTGATCCCCGTGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTGAATGGTATTAAAAGCTTCTCAAGATCATATCAGAATGGATTATTCATAAACTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCAGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTATGGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACGTGCCACCATCTTGTCTTCAGATGA 1260 0.4341 MGNLFWPAIVAALVFGFWVDAFTAYKYHHFNGTEFSLLEAQEQAFSSLTGRSPLMVGLTLIPSAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVKSCVYRKKTRRGSSRFMEKEIPFTGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDSEHKAAQLQFRGQRIWLAAVEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPHTTKVKCLSDAGLFLDAIDVSRGHTIRNLFSGVVGLQGVQKNLPRTCTNHLDPTSCFFPQNLIASIRTPLFILNTAYDSWQIQSSLAPSSADPRGYWHDCRLNHAKCTASQIQYLQGFRNQMLNGIKSFSRSYQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIAMAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1428 419 PANTHER PECTIN ACETYLESTERASE 4 418 - -
Vra8g1428 419 PANTHER NOTUM-RELATED 4 418 IPR004963 GO:0016787
Vra8g1428 419 Pfam Pectinacetylesterase 53 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1428 Vra-Chr8 31210447 31215543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1428 1 419 Carbohydrate Esterase AT1G57590 67.696 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1428 K19882 - gmx:100793403 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0852 3 8652311 8656791 Vra8g1428 8 31210447 31215543 PCT