Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1411 ATGGGCGAAGGCGGAGCGGCGACGGCGGTTGCGGAGGCTCAGTACTCGTTGGTCAAGACTTCGGTTTGGTGGGACATAGAGAACTGTCAAGTGCCCAAAGGGTGCGATCCCCACGCCATCGCGCAGAATATAAGCTCCGCTCTCGTTCGGATGAATTATTGCGGCCCCGTTTCCATCTCTGCTTACGGCGACACCACTGGCATCACTGCTTCCGTTCAGCATGCCCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCCGGTGTTAAAGATGCAAGTGACAAAAAGATTCTTGTTGACATGTTATTCTGGGCTGTGGACAATCCTGCACCTGCTAATTACTTATTAATATCTGGTGATAGAGACTTTTCCAATGCTCTTCATCAGCTGCGGTTGAGGAGGTATAATATTCTTCTTGCACAGCCTAAGAAAGCTTCTGCACCCCTAGTAGCAGCTGCTAAGAGTGTGTGGCTTTGGACTAGTCTCTTGGCTGGAGGACCTCCCCTTACCAAGGGTGAATCACTACAACTTGCTAATAATGACATCCAATCCTCTTCTGACTCCATACAAAGTACAGTCCATAATGCCTTTCAGATACCGCAGTATCTGGAATCCTATTCAGAAGTTCATACAGGAAATCAGAAATTTCCTGGTACAGGAAGGCAACTTGATTCTAGACATCATGGGAAGACGAATGGGAAAAATTCAAGTAAACCAAATAGACCAAAGGTCATGAATCCAGCTCCAGTTGGACTTCAAGAAAATTATGGCTATATAAATTCTTCTCGACCTGGGAACTATGCCCATAGTGTTCCCCCAAGTGGTTCTACAACAAATTTTACCCATAATGTTCCCCCAAGTGAATCTACACCAAATTTTAGCCATAATGTTCCCCCAAGTGGTTCTACTCCTAATTTTACTTGTGACAATCCTGATCAAATGCGGGGCAATAATGGTACTCCACCAGGAAATCATCAAAATCCACATTCACAGGCATCGAGATCAAATTCTTTTCCTTTGCAGCCTCCTTTTGCACCAAGCAGTTCATTTTCCCCAAATTCCCAAACTTTTGCAACTTCAGTAGTGCCAACTAGAACCGGTGGGCCCAGCTTCTCTGCAGCACCACTTACGAAGGTGCCAGATGTTGGTAATATTTATCCTAGTATCGCTCACGATCCACACCCCGTTAAATATTTGAACGGGGACTTGAAACAGAGTTCTTACAGTATTTCTTCAAATCCTATTAAGTCCATTGATGAACCACATGGGCACATGATACAGAAAGCACAACATTTGTATAATGGCCATTCACATGGTCCAAAACACCAACCTACATCAGCAACTGTGGGTAATAATAATCTTCCTAGTAATGGTATGTGGGGATCTCCAGGATTTCCTAAACCTTCTGAATACGTCCAAGGTCTTATAGGGGTTGTTTTACTTGCCTTGAACACACTAAAAAATGAAAAAATTATGCCAACCGAGTCAAATATAACGGATTGTATTCGATGTGGAGATCCCAAGCATCGCAGTACAGATGTCAAGAAGGCTCTGGAGAGTGCAGTTGAGCAGCAGATGGTAGTGGAGCAGAAAGTAGGTGCTTTGCGGTTGTTTGTTGGTAAGAATGATAAAGTTTGGAAATGTGTAAACCCTATAGGTGGTAATCCTAAGAAGCACTCAAAAGAGACATGGAATGAAATTAAAAAATTTCTATCTACTTCTTCGGGAAGATTAGCAATAATGAGTACGCAGTGCAAGGAATGA 1767 0.4403 MGEGGAATAVAEAQYSLVKTSVWWDIENCQVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTGITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPKKASAPLVAAAKSVWLWTSLLAGGPPLTKGESLQLANNDIQSSSDSIQSTVHNAFQIPQYLESYSEVHTGNQKFPGTGRQLDSRHHGKTNGKNSSKPNRPKVMNPAPVGLQENYGYINSSRPGNYAHSVPPSGSTTNFTHNVPPSESTPNFSHNVPPSGSTPNFTCDNPDQMRGNNGTPPGNHQNPHSQASRSNSFPLQPPFAPSSSFSPNSQTFATSVVPTRTGGPSFSAAPLTKVPDVGNIYPSIAHDPHPVKYLNGDLKQSSYSISSNPIKSIDEPHGHMIQKAQHLYNGHSHGPKHQPTSATVGNNNLPSNGMWGSPGFPKPSEYVQGLIGVVLLALNTLKNEKIMPTESNITDCIRCGDPKHRSTDVKKALESAVEQQMVVEQKVGALRLFVGKNDKVWKCVNPIGGNPKKHSKETWNEIKKFLSTSSGRLAIMSTQCKE* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1411 588 MobiDBLite consensus disorder prediction 212 363 - -
Vra8g1411 588 Pfam NYN domain 19 155 IPR021139 GO:0004540
Vra8g1411 588 PANTHER LIMKAIN B LKAP 8 584 IPR024768 GO:0005777|GO:0010468|GO:1903231
Vra8g1411 588 CDD PIN_limkain_b1_N_like 19 143 - -
Vra8g1411 588 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 8 584 - -
Vra8g1411 588 Gene3D - 15 162 - -
Vra8g1411 588 MobiDBLite consensus disorder prediction 256 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1411 Vra-Chr8 30997017 31001820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1411 9 181 C2H2 Transcription Factor Family AT5G61190 75.145 7.20e-84 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1411 - - vun:114190683 1016.91