Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1391 ATGTCCGAAGACAAAGACAGGGAGCAGTACGGAGTGCTCCTTTATTACAATTACGCTGAAATTCCAGACCTCAATCACCTCCTCACCTTCTACAATTCCAACTGCTCCTCCCTCAACCTACGAGGTCGTGTTCGCCTTTCAACCCATGGTGTCAATGTCACTGTTGGTGGCAATTTGTCCTCTCTTGAGTCCCACATCGAAGCGCTCAAAGCCTACAACTCCTTGTTTCACCGTACTGATTTTAAGCTCGCCACTTGTCATCACCCACTTAACGACAAAGTTGCCCGGGAGTGTGGCTTCACTTCTCTCTCTATTCGGATTGTGGACGAACTTGTTACTCTTAGTTCTCATCCACTGTTAAAAGCGCCTGATATCTCCAATGCTGGAATGCATCTATCTGCACTTGACTTCCATTCTTCCCTTCACAATGCCTACAAGGAGAGTCCAGAAAATGGCCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGGATTGGGAAGTTTCACGTGCCAAATGTTGAGACTTTGGATCCACAAGTTAGGCAGTACAGTGATTTGTCCTCGTGGATAGATGATAATGGTGACCGGTTGAAAGGAAAAAATATTTTCATGTATTGTACTGGCGGAATTCGGTGTGAGATGGCATCAGCATATATTAAGTCCAAAGGTGCCGGTTTTGAGAATGTGTTTCAGTTATTTGGTGGCATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGACCACCGGATATCAGTTGGAAGTTCAGATGCTAATATTATTGGTACCTGCCTCATGTGTCAATGTTCGTTTGATGATTACACTTCTCGCTGCCGGTGTACTTATTGCAGAATGCTTGTTTTGGTGTGCCGTAGTTGCGAGAGTGAATCTACCGTGTATGTTTGTGAGCTATGTCAGAAACAGGGCAAGCCCGAGTCAGCACAGTTAATTGAAATTGGAGAATCAAAAACATCATCGTCAGATGCCGAGTTCAACAACTTTTCTTCAGATTTGCCTCGAGTGCCCAGGGGAGACGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTGCATGGGTTTCGGCAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCATTAGCCAAGAAACTAAAGAAAATCACTGAATTTGTCTTTGTTGATGCTCCCCATGAATTGCCATTCATTTACCAAACCCCCATGTTTGAGTCAAATGAAAATTGTGCATCATCATCATTGCCATCTAGTCCTCCACCACCATTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTGTGGCACCCAACTTTGATGGAAGCAGTGGTGTTGACTGGAAGGTAGCAGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGTTGGATATGATATTTCATTATCACACTTGAAGAATGTCTTTTCCCAGGAAGGACCATTTGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACTACAAGAAGAGCTGAAAGGTGAAATGGACTTCAAATTTGTAGTCTTGTGCTCTGGCTTTGCTCTCCGGATGAAAGCCATGGAGCGTGGTCCTATCAAGTGTCCTTCTCTTCATATATTTGGTAATGAACATGGTAAAGACAGACAGATAGCTAACCAAACAAGCAAGGAACTTGCTTCTCTATATGAGGGTGATTGTTCTGCGATAGTTGAGCATGATAATGGTCATATAATTCCTACCCGGTCCCCTTACATTGATGAGATCAAGAATTTTCTTAATCGCTTTCTGTAG 1818 0.4323 MSEDKDREQYGVLLYYNYAEIPDLNHLLTFYNSNCSSLNLRGRVRLSTHGVNVTVGGNLSSLESHIEALKAYNSLFHRTDFKLATCHHPLNDKVARECGFTSLSIRIVDELVTLSSHPLLKAPDISNAGMHLSALDFHSSLHNAYKESPENGLVLLDARNLYETRIGKFHVPNVETLDPQVRQYSDLSSWIDDNGDRLKGKNIFMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIIGTCLMCQCSFDDYTSRCRCTYCRMLVLVCRSCESESTVYVCELCQKQGKPESAQLIEIGESKTSSSDAEFNNFSSDLPRVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKITEFVFVDAPHELPFIYQTPMFESNENCASSSLPSSPPPPLENCKKKFAWFVAPNFDGSSGVDWKVADGPFDPLQYQQQTVGYDISLSHLKNVFSQEGPFDGILGFSQGAAMAALISALQEELKGEMDFKFVVLCSGFALRMKAMERGPIKCPSLHIFGNEHGKDRQIANQTSKELASLYEGDCSAIVEHDNGHIIPTRSPYIDEIKNFLNRFL* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1391 605 Gene3D - 121 277 IPR036873 -
Vra8g1391 605 Gene3D - 1 112 - -
Vra8g1391 605 SMART rhod_4 139 246 IPR001763 -
Vra8g1391 605 Gene3D alpha/beta hydrolase 359 605 IPR029058 -
Vra8g1391 605 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 604 IPR020936 -
Vra8g1391 605 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 604 - -
Vra8g1391 605 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Vra8g1391 605 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 126 263 IPR036873 -
Vra8g1391 605 Pfam Serine hydrolase (FSH1) 361 596 IPR005645 -
Vra8g1391 605 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Vra8g1391 605 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Vra8g1391 605 SUPERFAMILY alpha/beta-Hydrolases 359 605 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1391 Vra-Chr8 30802210 30807055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1391 5 605 Sulfurtransferasese or Rhodanese AT1G09280 63.471 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1391 - - vun:114190679 1177.93