LGRPv2

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra8g1380	ATGGAAAACTTTTACAAGCTCAACTCCCTCCTATCTTGTGCCGAGGATGTTGTTAGAGGAGTCAACGTCAGCGTTTCCGCCGCCGCCGCATCTGAATTGAATCTAGGACTTGTGGCCAATAACTTCCTTCAGCTAGAAGAGCCAGAAACTTCCGATATGTCGGAACGGTTCATCAAGACCCAGATCGCCACTCACCCTCTTTATCCAAATCTAGTATCTGCTTACATAGAATGCCGAAAGGTTGGAGCACCGCCAGAACTTGCTTCACTTCTTGAAGAAATAGCCCGTGAAAGCCACCCGACGCATGCTCTTCGTGAGATAGGAGATGATCCCGAGCTTGACGAGTTCATGGAATCATACTGCGAAGTTCTTCATAGATACAAGCAGGAGTTGTCCAAGCCATTCGACGAAGCGACCTTGTTTTTGTGTAGTATCGAATCACAACTCAGCAATCTTTGTAAGGGAACACTTGCATTGCCACTGGATAACAACCCCTCAGACGAGGCGGCTGGGACATCAGAAGATGAATTGAGTTGGGAGAAGATGGAAGCAGTGGAAGGTGTCGAATCTTCTGGGTCTCGTCCCGGTGATCAAGAGCTTAAAGAAATGCTCCTTCGTAAGTATGGTGGTTATCTTAGCAGCTTAAGAAAGGAATTTTTGAAGAAAAGGAAAAAGGGTAAACTTCCAAAGGAGGCAAGGAGGATTCTCTTGGACTGGTGGAGCACTCACTATAGGTGGCCTTATCCTACGGAGGAGGAGAAAGTGCAACTATCAGAAATGACAGGACTTGATCAAAAGCAGATAAACAATTGGTTCATCAACCAAAGGAAACGGCATTGGAAACCATCTGAAGACATGCGATTTGCGATTATGGATGGTGTGAGTGGCAGCGCCATAGGTAGAGGACCTATGTAG	915	0.4645	MENFYKLNSLLSCAEDVVRGVNVSVSAAAASELNLGLVANNFLQLEEPETSDMSERFIKTQIATHPLYPNLVSAYIECRKVGAPPELASLLEEIARESHPTHALREIGDDPELDEFMESYCEVLHRYKQELSKPFDEATLFLCSIESQLSNLCKGTLALPLDNNPSDEAAGTSEDELSWEKMEAVEGVESSGSRPGDQELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKEARRILLDWWSTHYRWPYPTEEEKVQLSEMTGLDQKQINNWFINQRKRHWKPSEDMRFAIMDGVSGSAIGRGPM*	305

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vra8g1380	304	SMART	ELK_2	199	220	IPR005539	GO:0003677
Vra8g1380	304	Pfam	ELK domain	199	220	IPR005539	GO:0003677
Vra8g1380	304	ProSitePatterns	'Homeobox' domain signature.	257	280	IPR017970	GO:0000981\|GO:0006355
Vra8g1380	304	SMART	HOX_1	221	286	IPR001356	GO:0003677
Vra8g1380	304	PANTHER	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	1	293	-	-
Vra8g1380	304	Pfam	KNOX2 domain	107	153	IPR005541	GO:0003677\|GO:0005634
Vra8g1380	304	Pfam	KNOX1 domain	58	99	IPR005540	GO:0003677\|GO:0005634
Vra8g1380	304	ProSiteProfiles	ELK domain profile.	199	219	IPR005539	GO:0003677
Vra8g1380	304	SUPERFAMILY	Homeodomain-like	221	294	IPR009057	-
Vra8g1380	304	SMART	KNOX1_2	56	100	IPR005540	GO:0003677\|GO:0005634

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra8g1380	Vra-Chr8	30651525	30655767	Dispersed/Wgd

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra8g1380	52	297	Homeobox Transcription Factor Family	AT1G23380	55.294	7.20e-87	261

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HB-KNOX	Vra8g1380		KNOX2	9e-24	No_clan

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra8g1380	-		-	var:108324363	546.969

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra3g0886	3	8943421	8947510	Vra8g1380	8	30651525	30655767	PCT

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