Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1376 ATGGAAATCGTTCGTCCTCAGAGTCGCAGGAACTTCTTGTCTTCCTCCTCCGAAGCCGTTTCTGTTCCCACAATTCCCCTTTACCGCTCTGCTCCCTCATTCGAAGTTAGACTTGAGGAGTTCGAGTCCTTCGCCATCGACCGCCTCCGAGTTCTCAAGGGCATTTCTGATGGTATGTCGCGGGGGAAAAAACCGGAAGAAATGGAAAATTTGGTAAAGGACCTGTGGAAAGTGAATATGAGACACCAAGACGCTTCTGAAGTTCTGAACAAGGATATTATATCTCATTTTGCTCTACGTCTTGTGTATTGCAGAACGGAGGACTTGAGGAAATGGTTTCTTTCCATGGAATCTGCACTCTTTCGGTACCGCTTTCGTCTTCTGAATGCTGAAGCTCAGAGAGCAGTCATGGAAGAATTTGACCTTCCTTACAGGGCCGTTAGCAGTGTGGAATTTGAGAGCATAAAGGAGAAATTGGGACAAGTTGCACGGTCTACGGGTCAACCTTCACCCACTGCTGATGCTATCTTCTACAAGGTACCCTTTGAAGAAGTTCCAGAGCTTGTGGCTGGGCGGAAAGTATTAATTAGTCAAGGATATGCATATGTTGCAATGAATCAGATTGTTTCACTTGTAGCCACACTATTCCGCAGTCAGCTATCAAAGACACTCATCCTTACAAACAGAAAATGGACATCTTCAGTTCGAGAACAAGAGAAACATAGGTTGACTCCTATTGTGGAAGCCATGTGTGCAAGTTATTTGGGTCCTGACTATTCTCAGTCAAGAGAATGTGCTGATATATCACTAAAGGACATTGATCAAGTCGCCAAGAGCTCATTTCCTTTATGCATGCGTCACCTATTTGAAAAGCTGAAAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAATCTGGATGATGCACTTGCTTTTTGGAGGGCAGAGTTCTCTAAAAGGGTTGGTTTGGAGAAGTTTGAGAAACAGTACGCATACGGCATACGTCATAATTTTGGAAAGGAAGGGAAGAGAACAGATTATTCTCCCTATTCTTGTACAAAGATCATCTCATCGACTCCTGGAACGGGAGATCATCATGGTTGTCCCTATCGACATTTCAGCGAGGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTAAACAGTAGAGCAATGGAAGATGTGATAGACAAAGCGAGAAATAGACATTACCAGTTGGCTTGCACTTTGACATTTGAAGCTCTTCATGGCATGCCGTGTGATGCAGGGATTAACCATCCAAATCAATACTTCAGTGACAGCAGAAAGATTTTACATTCAAAGAATCCTTCAGCCTAG 1371 0.442 MEIVRPQSRRNFLSSSSEAVSVPTIPLYRSAPSFEVRLEEFESFAIDRLRVLKGISDGMSRGKKPEEMENLVKDLWKVNMRHQDASEVLNKDIISHFALRLVYCRTEDLRKWFLSMESALFRYRFRLLNAEAQRAVMEEFDLPYRAVSSVEFESIKEKLGQVARSTGQPSPTADAIFYKVPFEEVPELVAGRKVLISQGYAYVAMNQIVSLVATLFRSQLSKTLILTNRKWTSSVREQEKHRLTPIVEAMCASYLGPDYSQSRECADISLKDIDQVAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRAEFSKRVGLEKFEKQYAYGIRHNFGKEGKRTDYSPYSCTKIISSTPGTGDHHGCPYRHFSEENLRAALSRMGVNSRAMEDVIDKARNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSRKILHSKNPSA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1376 456 Pfam Eukaryotic and archaeal DNA primase, large subunit 177 442 IPR007238 GO:0006269
Vra8g1376 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 455 - -
Vra8g1376 456 Gene3D - 4 250 - -
Vra8g1376 456 PANTHER DNA PRIMASE LARGE SUBUNIT 1 455 IPR007238 GO:0006269
Vra8g1376 456 PIRSF DNA_primase_large 2 456 IPR016558 -
Vra8g1376 456 CDD PriL_PriS_Eukaryotic 27 445 IPR016558 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1376 1 456 Core DNA Replication Machinery Family AT1G67320 66.057 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1376 K02685 - gmx:100806321 837.795