Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1365 ATGAGAAAAATAATCATATACTTATTGATGACGATCACAATTGGGTGTTACAAAGTTGAAGGAAGAGAACCTATACTTCACAGGGTAGGAGGAGGAAGATATACTTGGACACCAAAAACTAACTTCACACAGTGGGCAAGTTATGAACACTTCTACAAGGGTGATTGGCTATATTTTGGTTTTGATAAGAGTCTACACAATGTTTTGGAGGTGAACAAAACAAATTATGAGAATTGTATTGATACAAATTTCATACAAAATATCACAAAAGGGGGGAGAGATGTTGTTCAACTTTTAGAAGCAAGAACATATTATTTTCTTTGTGGAAGAGGCTTTTGCTTTGAGGGAATGAAGATAGCCATAAATGTTGAGGAACCCACCTTCAAACCATCACCCTCAGCACTATCCAACAAAGCCCTTCATTCAAGTAGCATCATAAATACTAAACTCATTTTGTTTTTGGTCACTGTTTTGTGGTGGCCTTCCTTATCGGTGTGGGTGTGGCGGTCATTGGCTGTTTTCGTTGTTGGTGTGTTCGTCTTGCGAAATGACGACTTCTTCGACGAGGTTGACGGTTCGTCACTCAGTTTCGACAAAGTTCATATCTAG 609 0.3875 MRKIIIYLLMTITIGCYKVEGREPILHRVGGGRYTWTPKTNFTQWASYEHFYKGDWLYFGFDKSLHNVLEVNKTNYENCIDTNFIQNITKGGRDVVQLLEARTYYFLCGRGFCFEGMKIAINVEEPTFKPSPSALSNKALHSSSIINTKLILFLVTVLWWPSLSVWVWRSLAVFVVGVFVLRNDDFFDEVDGSSLSFDKVHI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1365 202 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
Vra8g1365 202 PANTHER BLUE COPPER PROTEIN 4 157 IPR039391 GO:0009055
Vra8g1365 202 PANTHER EARLY NODULIN-LIKE PROTEIN 4 157 - -
Vra8g1365 202 Gene3D - 26 125 IPR008972 -
Vra8g1365 202 SUPERFAMILY Cupredoxins 26 123 IPR008972 -
Vra8g1365 202 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vra8g1365 202 ProSiteProfiles Phytocyanin domain profile. 25 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1365 Vra-Chr8 30006782 30009141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1365 5 163 Phytocyanin Superfamily AT2G27035 47.170 2.97e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1365 - - vra:106770501 404.831