Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1360 ATGGATCATGTACAACTTATTGGAGATTATGGGTACCTTTCAAAACAACTGAGATGGATTTGTTGGCAAGGGTTTCCTTCTAAATACATTCCAAACAACTTTTGTATGAAAAATGTAATTGCAATGGAATTAAAGCATAGTAATCTTCAACTCGTCTGGAAACAACCCCAGGAATTACAGGTGTTAGAGAGGTTAAAATTCCTTAATCTTAGTCACTCCAAGTACTTGATAGAAACTCCTGACTTTTCAACACTACCAAGTCTTGAATGGCTCATTCTAAAAGATTGTTCAAGTTTGTGCAAGGTACACCCATCCATTGGAGATCTCTGCAATCTGCTACTGCTAAATTTGAAGAACTGCACAAATCTAAGAAGTCTCCCCAGAGAGTTATATAAGTCCAAATCTTTAAGAACTCTCATCCTATCTGGTTGTTTCGAGATTGACATATTGGAAGAAGATATAGGGCAAATGAAATCCTTCATAACTCTAATTACTAATTACTGA 504 0.3571 MDHVQLIGDYGYLSKQLRWICWQGFPSKYIPNNFCMKNVIAMELKHSNLQLVWKQPQELQVLERLKFLNLSHSKYLIETPDFSTLPSLEWLILKDCSSLCKVHPSIGDLCNLLLLNLKNCTNLRSLPRELYKSKSLRTLILSGCFEIDILEEDIGQMKSFITLITNY* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1360 167 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 159 - -
Vra8g1360 167 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 159 IPR044974 GO:0006952
Vra8g1360 167 Gene3D Ribonuclease Inhibitor 11 164 IPR032675 -
Vra8g1360 167 SUPERFAMILY L domain-like 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1360 Vra-Chr8 29969404 29970205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1360 6 127 WRKY Transcription Factor Family AT5G45050 30.328 3.11e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1360 - - vra:106770500 334.339