Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1329 ATGGAATATTCTCTTTCTCCTTTGTTGTCAAATCTTCAAAGCCTTTGGTTTTTTGTATGCTTAAAAGCCCTAATATCTAACTTGATTGCGAGATATTCAAAAAAACAAAGGCCAAAACTTCCCCCAGGTCCAAAGCCATGGCTTGTGGTGGGCAACCTTCCTGAGATGCTTACAAAAAAACCTGCTCATCAATGGATACACAATCTCATGAAAGAAATGAACACTGAAATCGCTTGTATCCGCCTAGGAAATACCTATGTTATCCCAGTCACATGTCCCACCATTGCCAGACAGTTTTTGGCTGAACAGGATGCAACTTTTGCATCAAGATCACTAACCACTTGCACTGATCTCGTTAGTAGCGGATATTTAACCACAATTTTAGTGCCATTTGGGGACCAATGGAAGAAAATGAAGAAAATCTTAAGAAGTTCTTTGCTTTCCTCAGAAAAGCACCTATGGCTCCATGACAGAAGGACTGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAAAGCAAAACTGTGAACAATGGTGTTGCTGGCCTTGTGAACATTCGAAGTGTTGCAAGGCATTATTGTGGCAACGTTATCAGGAAAATTGTTTTCAATAAAAGGTATTTTGGGAAAGGTAGGAAAGATGGAGGCCCTAGTTTTGAGGAGGAAGAACATGTTGATTCCATTTTCGTTTTACTTAGGTATCTTTACGCTTTTTCTATTTCTGATTATATCTCATGCTTGAGGAAACTTGACTTGGATGGACACCAGAAGAATGAAATAATGATTGCAACAGTGGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCAAATTTGCTGGAACGAGCCATTGATGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTTCAAGAATCAGATATACCAAAACTCAACTATGTAAAGGCCTGTGCAAGGGAAGCCTTTCGCCTTCATCCCATGGCACCTTTTAATCCTCCCCATGTCTCAATGAGTGGTACAACTGTGGGAAATTACTTCATCCCAAAAGGTAGCCATGTAATACTAAGTAGAAGAGAACTTGGAAGAAACCCAAAAGTGTGGAAAGAACCTCTCAAGTTTAAACCAGAACGTCACCTTAAGAGTGATAATGAGTCTAATGTTGTTTTGACAGAGCCAAATTTGAGGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCTGGAGTTTCGCTTGGGACCACAATGACCGTGATGTTATTTGCAAGGTTGCTCCATGGCTTCACTTGGACTGCACCATCCAATGTTTCAAAAGTAAACCTATGTGAGTCCATTGATGGTTTAAATCTTGCAGAGCCACTTATGGCAGTTGCTAAGCCCAGATTACAACCACAATTATATCACCTTTAA 1410 0.4028 MEYSLSPLLSNLQSLWFFVCLKALISNLIARYSKKQRPKLPPGPKPWLVVGNLPEMLTKKPAHQWIHNLMKEMNTEIACIRLGNTYVIPVTCPTIARQFLAEQDATFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKILRSSLLSSEKHLWLHDRRTEEADNLMFYVYNKSKTVNNGVAGLVNIRSVARHYCGNVIRKIVFNKRYFGKGRKDGGPSFEEEEHVDSIFVLLRYLYAFSISDYISCLRKLDLDGHQKNEIMIATVDNPSNAFEWALAEMINQPNLLERAIDELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPMAPFNPPHVSMSGTTVGNYFIPKGSHVILSRRELGRNPKVWKEPLKFKPERHLKSDNESNVVLTEPNLRFISFSTGRRGCPGVSLGTTMTVMLFARLLHGFTWTAPSNVSKVNLCESIDGLNLAEPLMAVAKPRLQPQLYHL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1329 469 Pfam Cytochrome P450 41 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 Pfam Cytochrome P450 260 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PRINTS E-class P450 group I signature 316 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PRINTS E-class P450 group I signature 357 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PRINTS E-class P450 group I signature 397 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PRINTS E-class P450 group I signature 407 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 Gene3D Cytochrome P450 32 258 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 Gene3D Cytochrome P450 259 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 SUPERFAMILY Cytochrome P450 41 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1329 469 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 259 467 - -
Vra8g1329 469 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 258 - -
Vra8g1329 469 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 15 258 - -
Vra8g1329 469 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 259 467 - -
Vra8g1329 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 400 409 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1329 Vra-Chr8 29364698 29366411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1329 40 467 Cytochrome P450 AT5G05260 48.571 5.35e-164 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1329 - K12153 vra:106770481 948.732