Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1314 ATGGAGAAGAAGGAGATGGTCGTGAAGACTGAGGATGCGGTTGGGTCCTCTTCCTTCCCTTGTTATAATTCAAACGTTTATCCATTCTCGAACGCCTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTACAGTCCTCTGCTTGAGTTGCCTCAACTTTCAACCGTTTCTGTGCCTCATCACTCTACAGTTAAGGCTCCACCTGATAACGGAAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCGAACTCTTCTTCTATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAATAAGACTCTAGACCAAGTTGAAGAAGATGACGATGAAGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTTGAAGGCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGTTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTACGAAGGCCAACACACACATCCAAGCCCGGTTATGCCTCGCTCAGGTGTCCCCGCTGGATACGCTACCAACTTTGCTTCAGTTTTTCCACAAGCAGGAAACTACTTATCCCACTATCAGGAGCAGCAGCAGCACCAACAGCAACAACTTATTTTCAACACATTGTCCTTTTTGGGTTTCCCTTACAATGATTCTTCCACTTCAAAGAACGCGGGTTTTACTCAAGAGAGACGGCTTTGTAATCCGGGGACGAATGCATTTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCCTCACACATGTTGAAAGAAGAGTAG 960 0.4594 MEKKEMVVKTEDAVGSSSFPCYNSNVYPFSNAFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVPHHSTVKAPPDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLDQVEEDDDEEEEGQQKTKKQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVPAGYATNFASVFPQAGNYLSHYQEQQQHQQQQLIFNTLSFLGFPYNDSSTSKNAGFTQERRLCNPGTNAFLRDHGLLQDVVPSHMLKEE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1314 319 PANTHER WRKY TRANSCRIPTION FACTOR 1 311 - -
Vra8g1314 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 311 IPR044810 GO:0003700
Vra8g1314 319 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra8g1314 319 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra8g1314 319 MobiDBLite consensus disorder prediction 87 112 - -
Vra8g1314 319 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra8g1314 319 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra8g1314 319 MobiDBLite consensus disorder prediction 69 149 - -
Vra8g1314 319 PIRSF WRKY_txn_fact_IIc 1 319 IPR017396 GO:0003700
Vra8g1314 319 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1314 Vra-Chr8 29094445 29096632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1314 34 319 WRKY Transcription Factor Family AT2G47260 49.231 4.15e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra8g1314 WRKY 2.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1314 - - gmx:100784158 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0784 3 8043878 8045753 Vra8g1314 8 29094445 29096632 PCT