Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1263 ATGCGTTCTAGCAATGCATCAAGCACCGGAGCCTCTAACGGTAACGGAGGGCGCCACCCTGTGTACTGCGGAGGCGTAGGAACAGTGGAAAATGGGCTTGCTCTTAAGGGGAAGGATGCCGAACTCAACTTCCCTGACTCTGCCTCTTCTCTTCCCGTTCCTGGTTCATCCGCTGCTCGTGACATTCAGATTGCTGCGGCCAGTGCTGCAGCCGCCGTCGGAGCAGCTAATGATGCACTGAGTGAAGGAAGCCGAGGAGGGAATGTTTCGATTTCAATGGCAAAAAAGTTTCGGCTTTTCAACGATGGGTGGAATTCCTTCTAA 324 0.534 MRSSNASSTGASNGNGGRHPVYCGGVGTVENGLALKGKDAELNFPDSASSLPVPGSSAARDIQIAAASAAAAVGAANDALSEGSRGGNVSISMAKKFRLFNDGWNSF* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1263 107 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 32 83 - -
Vra8g1263 107 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g1263 107 MobiDBLite consensus disorder prediction 1 15 - -
Vra8g1263 107 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1263 Vra-Chr8 28443817 28444234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1263 21 85 AP2-EREBP Transcription Factor Family AT5G51990 38.356 1.72e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1263 - - vra:106770460 177.948