Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1238 ATGATTCCCCTTTCCAGCATCCTGGGGTACGAAAAGTGTGACAGATACTTAATTTTTAGTGGAGAATCTGCCCTTGGGGATGGTTTTCGAGCATTTTTGTATTTTCTTGGCCTTGCTTACTGCTTTATCGGACTGTCGGCTATAACCGCTCGCTTCTTTCAATCGATGGAAAATGTGGTCAAGCATACAAGGAAGGTAGTGGAGGTAGATCCTGTTACTAAAACTGAAACCATTAGACATGAAAAAGTTTGGAATTACACTGTTGCGGATATTAGCCTCTTGGCCTTTGGAACTAGCTTTCCCCAGATATCATTGGCCACCATTGATGCTATACAGAACATGGGGAATCTCTATGCTGGAGGTTTGGGGCCCGGAACACTTGTTGGTTCTGCTGCATTTGATCTTTTCCCCATCCACGCCATTTGTGTAGTAGTTCCAAAAGCAGGAGAGCTAAAGAAGATTGCTGATCTAGGGGTATGGCTGGTGGAGCTGTTTTGGTCATTTTGGGCGTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTTGTGACTCTGTGGGAGGCCTTGTTGACAGTACTACAATATGGATTACTATTGATCCATGCTTATGCTCAAGATAAACGTTGGCCTTATATTTCTCTACCCATTGCAAGAGATGAGAGGCCAGAGGATTGGGTACCAGAGGAGACTCCTTATTTTAAACAGGAAGTCTATCAGAAGATGAATTCCTCTGAGATAAAGCATGTTAGAGAAGAAAATCGCGATACTTTTGATATTTTTTCCATTCATTCAGAAAACCCCACTGATCCATTGTGTGTCACAGTACCTCAAACAGATGATGAGGCTGAAATTTTGGACAAAGCTAAGGAAACAACCTTGGAGGATACCCACTTGCTTACAATTTGGAGACAGCAATTTGTGGATGCACTAAGGTTGAAGAACCCAGAAGCAAAAAAATTAAAAAATACGTATCTCCTCCTAGTTCGAATTTTCTGGCAATTGCTACTTTTACCATGGAGATTTCTATTTGCTTTTGTTCCTCCTTGCCAAATTGCTCATGGATGGGTCTCGTTCATTTGCTCCCTGCTTTTCATCAGCGGGATAGCTTACATTGTGACTAAGATCACAGAACTTATAAGTTGTGTTACAGGAATAAATGGTTACGTGATAGCATTTACAGCACTAGCCAGTGGAACCTCGTGGCCTGATCTAGTGGCAAGCAAGATTGCTGCTGAACGTCAAAAAACTGCTGATTCTGCAATTGCAAATATCACTTGCAGTAATTCAGTGAATATATATGTTGGAATTGGTGTTCCATGGCTTATTGATACTTTGTACAACTTCATAGCATATCGAGAACCTCTCAGAATCCAAAGTGCAGGGGGATTAAGCTTTTCACTGATTGTTTTCTTTTGCACTTCTGTCGGGTGTATATCAGTTTTGGTTTTCAGGCGTATAATTTTTGGAGCAGAGCTAGGAGGGCCTAGGCTCTGGGCATGGATTACCTGTGCTTTCTTCATGTTGTTGTGGATTATCTTTGTTGTACTATCTTCACTCAAGGTTTCTGGATTCATTTAG 1587 0.414 MIPLSSILGYEKCDRYLIFSGESALGDGFRAFLYFLGLAYCFIGLSAITARFFQSMENVVKHTRKVVEVDPVTKTETIRHEKVWNYTVADISLLAFGTSFPQISLATIDAIQNMGNLYAGGLGPGTLVGSAAFDLFPIHAICVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEETPYFKQEVYQKMNSSEIKHVREENRDTFDIFSIHSENPTDPLCVTVPQTDDEAEILDKAKETTLEDTHLLTIWRQQFVDALRLKNPEAKKLKNTYLLLVRIFWQLLLLPWRFLFAFVPPCQIAHGWVSFICSLLFISGIAYIVTKITELISCVTGINGYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQSAGGLSFSLIVFFCTSVGCISVLVFRRIIFGAELGGPRLWAWITCAFFMLLWIIFVVLSSLKVSGFI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1238 528 Pfam Sodium/calcium exchanger protein 356 520 IPR004837 GO:0016021|GO:0055085
Vra8g1238 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016021|GO:0055085
Vra8g1238 528 PANTHER SODIUM/CALCIUM EXCHANGER 9 212 - -
Vra8g1238 528 PANTHER SODIUM/CALCIUM EXCHANGER 304 528 - -
Vra8g1238 528 Gene3D - 86 220 IPR044880 -
Vra8g1238 528 Gene3D - 310 522 IPR044880 -
Vra8g1238 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 9 212 - -
Vra8g1238 528 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 304 528 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1238 5 528 Antiporters AT2G47600 70.943 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1238 K03452 K05849 gmx:100792839 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1238 8 28042053 28047669 Vra8g1238 8 28042053 28047669 ECH