Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1226 ATGGCAGGATCGTCAGAGAAGCAAGTGGTGGTGATCGGAATAGATGATAGTGAACAGAGCACGTACGCCCTCAAGTGGACCCTTGATCACTTCTTTCCGAGTCCAATCTTCAAGCTGGTTCTCGTTCACTCCAGACCCACCGCCACTTCCGCCGTGGGTCTCGCCGGACCTGTGTATGTAGGTGCCGCTGAGATATTGCCTATTGTAGATTCTGATTTGAGAAAGATTGCCACCAGAGTCGTTGATTCCGCCAGACAACTTTGCATCGACAAATCTGTAGATGATGTCACAGCGGAGGTTGTGGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTGGAAAAGTATCGTGCAGCAATATTGGTTGTGGGTAGTCACGGTTATGGAGCTATAAAAAGGGCTGTTTTAGGGAGTGTAAGTGACTATTGTGCTCATCATGCTCACTGCACGGTAATGATAGTGAAGAAGCCAAAAATCAAACATTGA 486 0.4712 MAGSSEKQVVVIGIDDSEQSTYALKWTLDHFFPSPIFKLVLVHSRPTATSAVGLAGPVYVGAAEILPIVDSDLRKIATRVVDSARQLCIDKSVDDVTAEVVEGDPRNVLCDAVEKYRAAILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKIKH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1226 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 160 - -
Vra8g1226 161 Gene3D HUPs 1 161 IPR014729 -
Vra8g1226 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Vra8g1226 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Vra8g1226 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Vra8g1226 161 CDD USP_Like 10 154 - -
Vra8g1226 161 Pfam Universal stress protein family 9 155 IPR006016 -
Vra8g1226 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 157 - -
Vra8g1226 161 PANTHER - 5 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1226 Vra-Chr8 27862612 27863747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1226 20 156 Plant U-box Gene Family AT5G57035 27.703 4.66e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1226 - - gmx:100816212 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1226 8 27862612 27863747 Vra3g0710 3 7472785 7474930 PCT