Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1214 ATGGCGACAATTAAACTTCATGGAAGCCCCTTCTCAACAGCCACCATGCGAGCTACTGCTTCCCTGTACGAGAAGGAGGTTGAATTTGAGTTTCTTCACGTTGACATGAAAAATGGTGAACACAAAAAGGAACCCTTCATTTTGCTCAATCCATTTGGGCAAGTTCCAGCGTTTGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACTCAATATATTGTTGATGAGTATGCTGATAAGGGGACCCAACTGATATGCAACGACTCGAAGAAGATGGCAATAGTGAGAATGTGGATGGAAATAGAGAGCCAAAGGTACGATCAAGCAGCTTCAAAACTTGTATGGGAACTTGCAGTAAAGCCTATGTATGGGATTCCTACGGATCCGGCAGCTGTAGAAGAGACAGAAGGGAAACTAGGTACTATTCTTGATTTCTACGAGAAAACACTGTCTCAAAACAAATACTTGGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCCACCCTTCATTACTTGATGAACACACCGAGCAAGAAGTTGTTTGATTCACGACCACATGTTCCTGCATGGATTGCTGATATTACAGCAAGACCAGCTTGGTCTAAAGTTCTTGCCATGCAGCCCAATCTAAGCAGTAAATAG 657 0.4338 MATIKLHGSPFSTATMRATASLYEKEVEFEFLHVDMKNGEHKKEPFILLNPFGQVPAFEDGDLKLFESRAITQYIVDEYADKGTQLICNDSKKMAIVRMWMEIESQRYDQAASKLVWELAVKPMYGIPTDPAAVEETEGKLGTILDFYEKTLSQNKYLAGECFTLADLHHLPTLHYLMNTPSKKLFDSRPHVPAWIADITARPAWSKVLAMQPNLSSK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1214 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vra8g1214 218 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
Vra8g1214 218 SFLD Main.5: Phi-like 1 212 - -
Vra8g1214 218 CDD GST_N_Phi 3 77 - -
Vra8g1214 218 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Vra8g1214 218 Gene3D - 89 214 - -
Vra8g1214 218 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 214 - -
Vra8g1214 218 SFLD Main (cytGST) 1 212 - -
Vra8g1214 218 CDD GST_C_Phi 92 209 IPR034347 -
Vra8g1214 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
Vra8g1214 218 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Vra8g1214 218 Gene3D Glutaredoxin 1 87 - -
Vra8g1214 218 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Vra8g1214 218 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1214 Vra-Chr8 27553655 27554891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1214 1 209 Glutathione S-transferase Gene Family AT1G02930 60.766 7.91e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1214 K00799 - gmx:100799868 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1214 8 27553655 27554891 Vra8g1214 8 27553655 27554891 ECH