Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1213 ATGGCGCTCAAGCTTTATGGTCTTCCAATGTCCACAAACACCACCCGTGCCATCATCTGTCTCCATGAGAAAGAGGTCGACTTTGAACTTGTTCCGGTCAATGTTTTCACTGCTGAGCATAAACAGCCTCCTTTTCTCTCCAAGAATCCCTTTGGTTTGATTCCAGTACTCGAAGACGGTGAACTCATTCTTTTTGAGTCCAGGGCCATTACTGCATACGTAGCTGAAAAGTTCAAGGAAACAGGACCTGATCTGATAAGGCACAAGGACGTAAAAGAAGGTGCACTGGTGAAGGTGTGGACGGAGGTAGAGGCTCACTACTACGAGCCAGCAGTGTCACCTATTATCTACGAGCACTTCGTGGCCCCTTTCCAAGGTAAAGAACCGGACAAGTCAGTGATTGACACCAACGTTGAGAAGCTTAAAAAGGTGCTGGATGTGTACGAGGAAAAGCTGAGCAGCACTAAGTACCTTGCTGGGGACTTTTATAGCCTTGCTGATCTTAGCCATGTCTCTGAAACTCACTACTTAATGCAGACCCCTTGTGCTTCCATGATCAATGAGCGTCCCCATGTAAAAGCTTGGTGGGAAGATATCTCTTCTAGGCCTGCTTTCAGTAAGGTTGAGCCAGGAATGACTTTTGGTAAGAATCAGGAATGA 660 0.4667 MALKLYGLPMSTNTTRAIICLHEKEVDFELVPVNVFTAEHKQPPFLSKNPFGLIPVLEDGELILFESRAITAYVAEKFKETGPDLIRHKDVKEGALVKVWTEVEAHYYEPAVSPIIYEHFVAPFQGKEPDKSVIDTNVEKLKKVLDVYEEKLSSTKYLAGDFYSLADLSHVSETHYLMQTPCASMINERPHVKAWWEDISSRPAFSKVEPGMTFGKNQE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1213 219 Gene3D - 87 209 - -
Vra8g1213 219 Pfam Glutathione S-transferase, C-terminal domain 115 203 IPR004046 -
Vra8g1213 219 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Vra8g1213 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 219 IPR010987 -
Vra8g1213 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 218 - -
Vra8g1213 219 PANTHER GLUTATHIONE S-TRANSFERASE F13 2 218 - -
Vra8g1213 219 SFLD Main.5: Phi-like 1 212 - -
Vra8g1213 219 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Vra8g1213 219 SUPERFAMILY GST C-terminal domain-like 73 211 IPR036282 -
Vra8g1213 219 Gene3D Glutaredoxin 1 86 - -
Vra8g1213 219 CDD GST_C_Phi 92 208 IPR034347 -
Vra8g1213 219 SFLD Main (cytGST) 1 212 - -
Vra8g1213 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vra8g1213 219 CDD GST_N_Phi 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1213 Vra-Chr8 27547305 27548950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1213 1 215 Glutathione S-transferase Gene Family AT3G62760 58.605 7.73e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1213 K00799 - gmx:100815147 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1213 8 27547305 27548950 Vra8g1213 8 27547305 27548950 ECH