Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1185 ATGACTGGCACTGATGAAGTCAACCTCAGTGAATCTAAGAGTGTTGTTCCACTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGACGTGCTGATGGAACGTTCAATCGAGAGTTGGCGGAATTCCTCGACCGCAAGGTCCCGGCCAACGCAATTCCTGTTGATGGGGTATTCTCTTTTGATCATGTTGATAGAAACACCGGCCTATTCAATAGGGTGTATCAAGTAGCTCCTCAAAAGGAGACTAGGTGCAACATAATAGAGCTGGAGAAGCCCCTGAGCACCACAGAGATCGTTCCTGTTATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCATCTGCTAACAGTGCTATCTATGACACTTTCTGTCGCCGCCTTGTGAACCTTTGCAAGGCTGTGGTGGTTTCTGTAAACTACAGGCGATCACCAGAGCATCGTTATCCATGTGCCTATGATGATGGCTGGGCAGCCCTCAAGTGGGTTAAGTCCAGGAAATGGCTTCAGTGTGGAAAGGATTCCAAGGTTCATGTGTACTTGGCCGGTGATAGTTCTGGTGGTAACATTGCTCATCATGTGGCTGTGAGAGCTGCTGAAGAAGATATTGAAGTACTGGGCAATATTCTTCTCCACCCACTGTTTGGTGGGGAGAAGCGAACTGAGTCAGAGAAGAAACTGGATGGGAAGTACTTTGTGAGGCTGCAAGACCGTGATTGGTATTGGAGAGCTTTTCTTCCAGAAGGAGCAGATAGAGATCATCCAGCTTGTAACCCCTTTGGTCCCAAGGGTAAAAATCTTGCAGGTCTCAAGTTGCCCAAAAGTCTTGTTTGTGTGGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGAATATGTGGAAGGTCTGAAGAATTGTGGCCAAGATGTCAAACTTCTTTACCTTAAGGAGGATCCCATACATAACTAA 963 0.459 MTGTDEVNLSESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANAIPVDGVFSFDHVDRNTGLFNRVYQVAPQKETRCNIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNLCKAVVVSVNYRRSPEHRYPCAYDDGWAALKWVKSRKWLQCGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGADRDHPACNPFGPKGKNLAGLKLPKSLVCVAGLDLLQDWQLEYVEGLKNCGQDVKLLYLKEDPIHN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1185 320 Gene3D alpha/beta hydrolase 1 319 IPR029058 -
Vra8g1185 320 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vra8g1185 320 PANTHER ARYLACETAMIDE DEACETYLASE 2 317 - -
Vra8g1185 320 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vra8g1185 320 PANTHER GIBBERELLIN RECEPTOR GID1B 2 317 - -
Vra8g1185 320 SUPERFAMILY alpha/beta-Hydrolases 100 313 IPR029058 -
Vra8g1185 320 Pfam alpha/beta hydrolase fold 108 315 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1185 Vra-Chr8 26996035 26998880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1185 1 318 Carbohydrate Esterase AT3G63010 75.235 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1185 K14493 - gmx:100804463 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1185 8 26996035 26998880 Vra8g1185 8 26996035 26998880 ECH
Vra8g1185 8 26996035 26998880 Vra3g0632 3 6895551 6898295 ECH
Vra3g0062 3 696435 699190 Vra8g1185 8 26996035 26998880 PCT