Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1104 ATGGCTCTATCACCTCTATCATCGCTGAATATGATTCCGAAGACTCCGTCGGAGTATCTATCCTTCGCGTTAGGGTTTCTGCTTTGTGCCACAGTCCCTTTCGTTCACGCGGAGTCATCCACGTGCTTGACAGTCTACAAGAATGGCGGTGCTCCGGCGGTGTTTCAGTCTCCAAAATGCCCCCGCTGGAAGCTCTCCGACTACGATTCACCTCCCAAAACCACGGCGCGTTGCCAGATTGCGATGCTCCAAGGCCACAGAAACTCTCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTCCCCATTTTAATTTATCGCGGAACAGGTGTGGACGGGATCAAGGAGGTTGCGGTTGGCATTGTGGCCGTTTTCGACGGTCATAACGGAGCAGAAGCTAGTGAGATGGCATCGAAACTTTTGTTGGAGTATTTTGTTCTGCATACTTATTTTCTCCTAGATGCTGCCTTTTCTGTTATTTCAAAGACATCAACAGGAGCATGGCTTCACAAGAGAGACCGTGATCATGCAAACTTACTGCATAGATGGAAGGAGATTCTAGGTCCAGAATGGCATGGACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCGTTGTTGAGGGCAGTCCATGACATTGATGCTAAATTTTCTGAGGAAGCGTCTAGAAATAATTTTCACTCTGGATCAACAGCTACCATTGTTTTGGTAGCGGATGATAAAATTTTGGTTGCCAATATGGGAGACTCTAAGGCCATATTGTGCTCTAAAAATTTTCAGTCTCCCAAAGAGGCTAAAGACTTATTATTAAAGCTATATAGACAGAAAGAGCATGATGGTTCTGTTTCTATGTGGGATCGTGAAAAGTACAAACTGGCTTCATCCCATGGTCTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCAGATAGAGTTGATGAAAGAAATCGGGTGGAAACAGCTGGAGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGGGCTATCGGTGACCTACCCTTTAAACGTTATGGCGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTATTTGGTGGTAGCATCGGATGGTGTATTTGAGAAGACAAGCTTGCAGGATGTCTGTGATTTGTTGTGGGAACTGCACAGTTACAGTAACATGAGATCAGAGTGCGCCCATTCTTCCTATTCGTTGGCAGATTTAATTGTTAATAATGCCTTAAAAAAGGGCAGTATGGACAATGTGGCAGCCATTGTCATTCCTCTGGAGTCTGTCAAATCCTCTGCAAACTCGCCTAGGGGAAGTTATATTGGAAAGAGGGATGCTGGTTTCCCATTTGGTGTGCAAGAATCTTCCTTCAAAAGCTCAGGTAATGGCATCTTGTCTGACCTTATGCACTTGGAGCACCCTCATCTGGTAGATACCAAGTTGAAGCGAATATTGGTTGAAGTGAAAGATGCTGATTTTGGCTGCTTTTATTTAGCTGAAAATCTTGATGAACCAGAGGACTCCAAGCGAATTGCCAAAAAAGTTGACTGGGACGACTATTTGTATGAACTACCTCCGCCTCCACCAGATTCCCTTTCTCATCATCCCGCTTCAGGGGGTCTTGTCGATTTATACAATAACCAAAACTTTTGCTTTGACTATGGTCCAACTATTAATGAAGCTGAAGACCGGTGCATAAATCCTGAAGGCTTTGCTAGTTTCATTGGTCTTCTTGAATCAATTCCTTTGCATGATAATGATTCCAGAAATGGGTCTTCTGATTATTCAATGCCTGATTTGAGGTATGTGTTGAAGAAGAGTTTCGGACGTGGGTCATTTGGTGAAGTGTGGTTGGCTTTTCATTGGAATTGTTATCAAGATAGTAATGTTGAAAAAGAGAACAGGGATGATACAAATACAACCAACAACACAACGGCTTCTGATTGTCAGAATGGTCCTTCTAATTACACCCTGTACATCTTGAAACGTATAATGGTGGAGAAAGGGTCAGCTGTTTACTTAAGTGGTCTAAGGGAGAAGTACTTTGGAGAAGTTTTTTTAAATGCCTCTACATGCTTTGAAGATCCATTATCGATTGGAAAATCAAATTGTGTCTTGGAATCATCACATGAGAATTCATTTTCGAACAAATTTCGACCACAAAGAACCCTATATGAAGAAGGCTTGAATCATATTGCAAGATATGTGGAATCTTTTGAGTCTCAAGCAAACGAAATTTGGCTTGTATTTAGTTTTGAAGGTGTGTCACTGTCAAAACTTCTCTATTCCATGGAAGATGCATATGATACGACTGACCAAGAAAGACTTGAGCAAGCTAAACAAGCTCAGATACTACGACCCTCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAGACAGAAATGCGTAACCTTATCTGGCAGCTGCTGCTGTCAACAAAGACGGACAAATATTACATTTCCCAGAATTTATTATTGATTTTTCCTGTGCTGCATATTCTTGACAACCCTCAGTTATTAGCTCTCAAGTCCTGTCATGATCGCAACATCACACACAGAGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAGATTCCCACTAAAGTTAATAATTCTGCCACCAAAATGCGTATTATTGACTTTGGAAGTGGACTTGATGAATATACATTAAATAATTTGTATGGTTCTACTGGGCCTTCGAGAGCTGAGCAAACCTATGAGTACACACCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGCCAACAAGCTCGACTTTGAAATATGACATGTGGAGCGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGGACACCAGATGCTTTTCAGATAAATGCTTTAACACGGACTCTATTAGATCAACATCTAGAAGGCTGGAATGAGGGCGTGAGGGAGCTGGCATATAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGATCTCCAGGTCCAGCAGTTTCTCAAAAAAGTATGACCCAGTGAACCAAGTTGGAGTTTCACCTGCATCTTGGAAATGCTCTGAAGAATTCTTTTCTCGTCAAATTAGGAACAGAGATCCCCTTAAAATAGGTTTTTCAAACATCTGGGCTTTACGGTTAGTGCGTCGATTGTTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTTCAACATCCTTATTTCCAACATCCCCGCAGAGAGTGA 3354 0.4222 MALSPLSSLNMIPKTPSEYLSFALGFLLCATVPFVHAESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPKTTARCQIAMLQGHRNSQEDRALCVLDVRIPFPILIYRGTGVDGIKEVAVGIVAVFDGHNGAEASEMASKLLLEYFVLHTYFLLDAAFSVISKTSTGAWLHKRDRDHANLLHRWKEILGPEWHGLHFERFQNTFSPNFDDSFHLEILKEALLRAVHDIDAKFSEEASRNNFHSGSTATIVLVADDKILVANMGDSKAILCSKNFQSPKEAKDLLLKLYRQKEHDGSVSMWDREKYKLASSHGLTHFAVKELTSDHHPDRVDERNRVETAGGQVQNWGGVPRINGQLAITRAIGDLPFKRYGVISAPEVTDWQPLTANDSYLVVASDGVFEKTSLQDVCDLLWELHSYSNMRSECAHSSYSLADLIVNNALKKGSMDNVAAIVIPLESVKSSANSPRGSYIGKRDAGFPFGVQESSFKSSGNGILSDLMHLEHPHLVDTKLKRILVEVKDADFGCFYLAENLDEPEDSKRIAKKVDWDDYLYELPPPPPDSLSHHPASGGLVDLYNNQNFCFDYGPTINEAEDRCINPEGFASFIGLLESIPLHDNDSRNGSSDYSMPDLRYVLKKSFGRGSFGEVWLAFHWNCYQDSNVEKENRDDTNTTNNTTASDCQNGPSNYTLYILKRIMVEKGSAVYLSGLREKYFGEVFLNASTCFEDPLSIGKSNCVLESSHENSFSNKFRPQRTLYEEGLNHIARYVESFESQANEIWLVFSFEGVSLSKLLYSMEDAYDTTDQERLEQAKQAQILRPSKWWHWLKTTEEGQTEMRNLIWQLLLSTKTDKYYISQNLLLIFPVLHILDNPQLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNSATKMRIIDFGSGLDEYTLNNLYGSTGPSRAEQTYEYTPPEALLNATWYQGPTSSTLKYDMWSVGVVMLELVLGTPDAFQINALTRTLLDQHLEGWNEGVRELAYKLRSFMELCILIPGISRSSSFSKKYDPVNQVGVSPASWKCSEEFFSRQIRNRDPLKIGFSNIWALRLVRRLLHWDPEDRPSIDEALQHPYFQHPRRE* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1104 1117 Pfam Protein kinase domain 872 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1104 1117 SMART PP2C_4 69 455 IPR001932 -
Vra8g1104 1117 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 31 619 - -
Vra8g1104 1117 SMART serkin_6 633 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1104 1117 ProSiteProfiles PPM-type phosphatase domain profile. 77 457 IPR001932 -
Vra8g1104 1117 SUPERFAMILY Protein kinase-like (PK-like) 632 1113 IPR011009 -
Vra8g1104 1117 ProSiteProfiles Protein kinase domain profile. 633 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1104 1117 PANTHER ALPHABET, ISOFORM E-RELATED 31 619 - -
Vra8g1104 1117 Pfam Protein phosphatase 2C 218 450 IPR001932 -
Vra8g1104 1117 CDD PP2Cc 84 457 IPR001932 -
Vra8g1104 1117 SUPERFAMILY PP2C-like 75 459 IPR036457 -
Vra8g1104 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 883 895 IPR008271 GO:0004672|GO:0006468
Vra8g1104 1117 Gene3D Transferase(Phosphotransferase) domain 1 871 1112 - -
Vra8g1104 1117 Gene3D - 73 464 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1104 Vra-Chr8 25659409 25698289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1104 697 1114 PP2C-type Phosphatase Gene Family AT3G63340 59.330 3.43e-164 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Vra8g1104 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1104 - - gmx:100781476 1857.8