Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1093 ATGACGACTGGTATAGTACGAGACCAGAACCTGGAGAAACACATTCACAAGCAGATGGGGTGCATGGCTGGCTTTCTTCAGATCTTTGACCGTCATCAGATACTCACTGGAAAACGCATCTATTCCCCCAAACGTCTACCTCCGGCTTCACCGGAGCCTGACAAAGTTACTGCCTCGCCGGCTCGTTCCGTGCAGTCGCCGGCTAGGGAGGTGGTCCAATCCGAACCCAAGGCCAGTTCTCCTGCTCTCCCTGTTCTGGAATTCAAGGAAGGCACGCGATCCTCCTGGAAGTTCTCGCGAGAGGCTCCGAGACTGTCTCTTGACAGCAGAGCCGTGGTGGACGCCAAAGGAACTCTTCACCTTCACACCCGAGAGATCCCTTCGGAGAACGATGGAGACAAGCAGCGTCGTTCCACCAGCGTCATTGCCAAGCTTATGGGCCTGGAGCCCCTGCCCGATTCAGAGCCCGGACCAGGGCCCATAGCAAAGCTGCAGAGATCCGCTTCCGAGTCCAGAGTGTCCAGAGATCTGTCTCTGCCTCTGCCACTGCCACAGTGTCGTTTTCTGGACACAAACAATTTCCCAAGCGCGGTTCAGGTCACCAATGTGGTCCTCGAGAATAATAATGCTGCAATCGATGCCCGATTGAGCAATGGCAGAGCTGCAGATCCACCCAGGCAAAGGGTCAAGAAGAGTTTCTACGACTCGGCGGATTTCTTCCCCGAACCCAAACACACAGCTTCTGTTTACGGGGAGATTGAGAGGAGGTTGCGGATGCGAGGGATTAACGAGCCATCCAAGGATCTCCACACTCTCAAACACATCCTCGAGGCCTTGCAGCTCAAAGGGCTTTTGCATTCCAACGGCAAATCCAATCAATCTCCCATTGTCGTTATGAAGCCTGTCCGATCGATGAACCGGACTGGAAACGATTCTCCTCCCCCTCTCCTCCGGTCCAGTCCTCGCCGGAGCCCCCGAGTTGGGAACGAGAACAGGAGGATTGACCAAAATGAGCGGAGTTCAATGAGTCAAAGCAATAGAGCACTAAGCTCGAGTCCAAATAGGAGGAAGCAACAAAACGTGGAACCGCAGAGGAAAGTGGGCGTTGATTCGAGAAGGGGGTCTGTGTCTGTCTCTCCTGTTCATTCTCCCAAGGCGAGCCCCAGAAGGAATGCAGGCAATCAGCAGGTGCCATGTGGATCGCCTAGAGTGAGAAGAAATGTGGAGCGGAAGTTGAAAATGCTGGGTGGGGCAGAGGATGAATCCTCTACAGTTTCAGAGAACAGCTTCAGCACTTCTTCATATCCCGATACAGAGAGGTACAGGTTGGAAGAGTATAAGGAAGGAAAAGATCTGTTGGATAGGTGTGATAAGCTGCTGAACAGCATAGCAGAAATAACAGCAGCCAACGAGTTGCAACCGAGTCCAGTATCGGTTCTGGACTCATCGTTTGACAAGGACGACTGGTGTTCACCATCCCCAATAACAAAACGATGCATTGATTACAAAGATCAAGCGGCGGAGTCAGAAGATGATATGTGGAGTGCGGCACTGTGCAGCAGCGAGGAGGCAGCGTCGGAGGATTGCGATTTCGTGTACGTATCGGAGATTCTTCGAGCGTGCAGTTACTTGCCGGAAGAGTGCGACATTTTTCTGTTACTGGAGAAGCAGCAATGCCTGAAAGGAAAGGATACCTCAAAGGCTTCGACGCTGCAGAGGCGGTTGATCTTCGACACTCTCCAGGAGATCCTGGAGCGGAACCAACAGTTGCCGCCGTGGAAGGCGGTGTCGTACGGCGAGCAGAGGCAGAAGATCTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAAGAATCGGAGTCGGAGGACTTGTTCAAGGTTATATGCGGAGTGTTGAAGAAGGACATGGCGGAGGAGATGCCGGGGTGGGGAGAATGGGCGGTGGAGATGGGAGATGTGGTGTTAGACATTGAACGTCTCGTGTTTAAAGATCTGGTTGGCGAAACCATTCGAGAACTCGCTTCGTTTTCTCCTCATTGTAACAACGACAAGCTACCCGCGCTTCGTAGGAAACTCCTCTTTTGA 2082 0.5293 MTTGIVRDQNLEKHIHKQMGCMAGFLQIFDRHQILTGKRIYSPKRLPPASPEPDKVTASPARSVQSPAREVVQSEPKASSPALPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGTLHLHTREIPSENDGDKQRRSTSVIAKLMGLEPLPDSEPGPGPIAKLQRSASESRVSRDLSLPLPLPQCRFLDTNNFPSAVQVTNVVLENNNAAIDARLSNGRAADPPRQRVKKSFYDSADFFPEPKHTASVYGEIERRLRMRGINEPSKDLHTLKHILEALQLKGLLHSNGKSNQSPIVVMKPVRSMNRTGNDSPPPLLRSSPRRSPRVGNENRRIDQNERSSMSQSNRALSSSPNRRKQQNVEPQRKVGVDSRRGSVSVSPVHSPKASPRRNAGNQQVPCGSPRVRRNVERKLKMLGGAEDESSTVSENSFSTSSYPDTERYRLEEYKEGKDLLDRCDKLLNSIAEITAANELQPSPVSVLDSSFDKDDWCSPSPITKRCIDYKDQAAESEDDMWSAALCSSEEAASEDCDFVYVSEILRACSYLPEECDIFLLLEKQQCLKGKDTSKASTLQRRLIFDTLQEILERNQQLPPWKAVSYGEQRQKIWSEFRRIREREESESEDLFKVICGVLKKDMAEEMPGWGEWAVEMGDVVLDIERLVFKDLVGETIRELASFSPHCNNDKLPALRRKLLF* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1093 693 MobiDBLite consensus disorder prediction 338 358 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 301 317 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 59 73 - -
Vra8g1093 693 PANTHER OS11G0587300 PROTEIN 1 693 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 421 436 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 147 169 - -
Vra8g1093 693 PANTHER LONGIFOLIA PROTEIN 1 693 IPR033334 GO:0051513
Vra8g1093 693 Pfam Domain of unknown function (DUF4378) 530 667 IPR025486 -
Vra8g1093 693 MobiDBLite consensus disorder prediction 301 436 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 41 84 - -
Vra8g1093 693 MobiDBLite consensus disorder prediction 376 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1093 Vra-Chr8 25386754 25390082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1093 419 693 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 47.143 4.35e-69 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1093 - - gmx:100777397 1081.63