Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1054 ATGGAATCTGAAATTTTGTTTTGGTTAGTTCTTCTGTTTGCAACTCCCCTATGGTTCTTAGCCACAATAGTATTTAAAGGCAAACCACCACCCTCTCCTCCTTCTTCCACGCCCCCCAAAGTCTATCCTATCATCGGTTCAGTGCCGTCCATCATAGCAAACAAGCATCGACGCATACACTGGACATCCGACATACTCCATGCCTCTCCCTCTTCCACCTTCCTCCTCCACTGCTGCTTCGGCTCCCGCCATCTCTTCACAGCAAATCCTACTGTAGTGCACCACGTTCTCAAGACCAACTTCCCACTCTACCAGAAGGGCCCAACCTTCAAATGCGCCCTTGACGATTTTCTCGGCCGGGGAATTTTCAACGCAGATGGCCCCGACTGGAAACTTCAACGCCAAATCTCCAGCCATGAATTCAGCACTCAGAGCCTCCGCAAGTTCATCGAAACCGTCGTCGACGTGCAGCTCTCCGACCGCCTTCTTCCCCTTCTCGATGACGCATCCCGGAACAAAACCATCATCTCAGACTTCCAAGATACTCTCCAACGCTTCACCTTGGACAACATCTGCAAAATCGCTTGCGGCTTCGACCCCGAGTGCTTCCTCCGGGAAACCCCCTTCACCACCGCCATAACCGACGCCACAATAATCTGCAGTAAGAGACTACACGCGGCGTTCCCTCTGATTTGGAAAACCAAAAAAGTCCTTAACCTAGGCTCGGAGAAGCGGCTGAAGGAAGCGGTCTCGGAAGTGAAGGCTTTGGCAAGGAGAATAATAAGAGAGAAGAAAAAGGAGCTTCGGGAAAAGGAAACCCTAGATTCCATGGATCTTTTGTCACGGTTTTTATGCTCAGGCCATTCGGACGAAGAATTCGTTATAGATATAATACTCAGCTTTATCATCGCGGGGAGGGACACAACCTCAGGTGTGCTCACCTGGTTCTTCTGGCTCCTCTCTAACCACCCGCAAGTGGAGGAGGAGGTTCTGAAGGAGGTGACGCAGAAAGACACGGTGTACACACACGTGTGTGAGGAAATGAAAAACATGGTTTACACGCATGCGGCGTTGTGTGAGACCATGAGGCTTTACCCACCCGTTCCGGCGAACTCGAAAGAGGCCATGCGCGATGATGTTTTACCGAATGGGAGTTTGGTGAAGAGAGGGTGGAGGGTGACGTATCATATTTACGCCATGGGGAGGTCGGAGAAGATTTGGGGTCCGGATTGGGCGGAGTTTCGGCCGGAGAGGTGGCTGACTTGGGAGGAGGTGGAAGGCAGGTGGAAGTTTGTGGCCGTTGATGCTTTCACTTATCCCGTGTTTCAGGCTGGTCCAAGGGTCTGTTTGGGTAAGGAAATGTCGTTCTTGCAAATGAAACGAATTGTGGCCGGGATTTTGAGACGCTTTAAGGTGGTTTCCGACGTGGCGGAACCCAAGTACGGTGGCTACTTCACTTCTTTCATGGTGGGTGGCTTCCCCGTCAAAATTCAGAATCGTAATTAA 1506 0.512 MESEILFWLVLLFATPLWFLATIVFKGKPPPSPPSSTPPKVYPIIGSVPSIIANKHRRIHWTSDILHASPSSTFLLHCCFGSRHLFTANPTVVHHVLKTNFPLYQKGPTFKCALDDFLGRGIFNADGPDWKLQRQISSHEFSTQSLRKFIETVVDVQLSDRLLPLLDDASRNKTIISDFQDTLQRFTLDNICKIACGFDPECFLRETPFTTAITDATIICSKRLHAAFPLIWKTKKVLNLGSEKRLKEAVSEVKALARRIIREKKKELREKETLDSMDLLSRFLCSGHSDEEFVIDIILSFIIAGRDTTSGVLTWFFWLLSNHPQVEEEVLKEVTQKDTVYTHVCEEMKNMVYTHAALCETMRLYPPVPANSKEAMRDDVLPNGSLVKRGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLTWEEVEGRWKFVAVDAFTYPVFQAGPRVCLGKEMSFLQMKRIVAGILRRFKVVSDVAEPKYGGYFTSFMVGGFPVKIQNRN* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1054 501 Coils Coil 246 266 - -
Vra8g1054 501 PANTHER CYTOCHROME P450 8 499 - -
Vra8g1054 501 Pfam Cytochrome P450 38 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 Gene3D Cytochrome P450 23 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 499 - -
Vra8g1054 501 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g1054 501 SUPERFAMILY Cytochrome P450 30 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1054 Vra-Chr8 24571952 24573741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1054 9 500 Cytochrome P450 AT5G63450 44.689 1.64e-133 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1054 K20769 K20768 gmx:100781020 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1054 8 24571952 24573741 Vra8g1054 8 24571952 24573741 ECH
Vra3g0165 3 1869699 1871458 Vra8g1054 8 24571952 24573741 PCT