Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1040 ATGAATGAGGAAATAAATACCGATGATGAGAGTGGTTTGAGGTTGGTTCCTACTTTGAACATGTGTTTTGACACAATGCAAGAAGCAAAGAAATTTTATTCTGACTATGGGAGAAGATGTGGATTTGGCGTTCGAACGAGAACTTCAAAAAGGGATGGCAACAACATAGTGTATTACTTGAGATTGGTATGTTCTAGGGAAGGTAAATATGTTTCCAGCATTCGTCCAGAGGTCAAAACTCTTCCCAGTCAAACTAATCAATGCCCTGCTGGAATAACCATTGCACGAAAAGATGAGAAATGGTTTGTTAGGACTGTAGTTTTATATCACAGTCATGAGCTGTGTCCACAAACCTCCAATCTAATCCGTGGTAATAGGCAATTGAACATGCATGCCAAGCACACTTTGGAAGTGAATGATGATGCCGGTGTACGTATTAATAAGAGTTTCCTTAGCATAGTTAGTGAAGCGGGTGGATATGAAAACATGCAATTTGTGGAGCGAGATGCTAGGAACTTCATTGGTCAACATAGAAGGTCATTGTGTAAGGAAGGTGATGGACAAGCATTGCTTCGGCACTTTTCAAAAATGAGAGACCTAAATAATGATTTCTTTTATGACATCGAGATGGATGAAGATAATAGAGTTACTAGTGTATTTTGGGCAGATGCTCGAAGCCGAGCTGCATGTGAGGAGTTCGGTGATGTCGTGTCGTTTGACACCACTTAA 729 0.4033 MNEEINTDDESGLRLVPTLNMCFDTMQEAKKFYSDYGRRCGFGVRTRTSKRDGNNIVYYLRLVCSREGKYVSSIRPEVKTLPSQTNQCPAGITIARKDEKWFVRTVVLYHSHELCPQTSNLIRGNRQLNMHAKHTLEVNDDAGVRINKSFLSIVSEAGGYENMQFVERDARNFIGQHRRSLCKEGDGQALLRHFSKMRDLNNDFFYDIEMDEDNRVTSVFWADARSRAACEEFGDVVSFDTT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1040 242 Pfam FAR1 DNA-binding domain 31 115 IPR004330 -
Vra8g1040 242 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 242 IPR031052 GO:0006355
Vra8g1040 242 PANTHER OS03G0843700 PROTEIN 7 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1040 Vra-Chr8 24069967 24070695 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra8g1040 FAR1 8.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1040 - - vra:106770395 499.204