Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1034 ATGCAGATGCTCATAGACAAAGAAATGTCCAAACAGAAAGACTCCAAGCACTACCTACCAAATGTTGTAGCAAAACTAATGGGGCTTGAAACCCTTCCAAGGGGAGAGCCTAGTTTATCTATGGAGAGAAGCTACAGAAGTGCTTATCCTCAACAAATGAATGCTCCTGTAGGCTTCCCATTCAGGCATTGGCAGCAGGAAGATAGGTTTATGGACAGGGAAATACTTCATGAAGTTCACCCAAGCACAGAACAGGTTGCTTACAAAGAAATGTATGAAATATGGCAGCAATCTCAGAGAGCAAGGCATGATAGAGGAAGATGGAGTGAAGATGTTGATGAGAAAAGAATGGCTCTCATTCGTCAGAAATTCATAGAAGCAAAACATCTGTCAACCGATGAGAGAATGCGTCAATCTAAACAATTTAAAGATGCCTTGGAAGTTCTAAGCTCCAACAGTGATCTCTTAATGAGGTTATTGGATTCTCAAAATGTTTACGAATTTTACTCAAGTCGACGTACTGATACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGACGATAATGACAAACCAGCCAGAAAGGAGAAAAGAAACAATAGACTAATTAAGAAATCACCAAATGTTGATCAAGCAGCTGGGTGGGAGAACACGAATTCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCCCCAGTTCGAACCACTCGAATTGTGTTGCTGAAACCTAGCCCTGGGAGGACACCTGAGCAAAAGGATGCGGTTTCTCCAACAACAACATCACCACCAAATCTGAGAAGTGGTAATTGCCATCAGGGACCTGAATATGACGATGCAATACAATCCATNAGAGTGGCAAAAGAGATCACACAGCAAATGNATAAGGGTCTGTGGAGCTATCAAAAGGATAAAACTCCACATTATTCTTCAGTGATTTCCAATGGCTATTCTGATGATGAGAGTTCGTTCAACAAATCATATCACGAGTATGCATCAGCAAATTTCAGTGATTTGGAAGCTACGCCAATGTCACCGCTGCCAAGGCTTTCATGGGATTACAATTACATCAATGGCTGTAGCAGTCCTTATTCTACAATGTCCTTGGGTCGCGTGCCTTGCTCCCCTGAGTCATCAGTATGCAGAGAGGCGAAGAAAAGGCTTTCTGAAAGATGGACTATGATGACATCAGATAAGGGTCCTCAAGAACAAACGAAAGTGAGAAGAAACTCTACCTTGGGTGAGATGCTTTCTCTTACCCACATGAAGAAATCTGCAAAATCTGTGGTTGAGAGTATTCAAGAGGACCAAGAACCTGGAAAATCTGTTTCTTGCAGTCATTCTTTCAATGCAGAAATAAGCATTGAGGGCTCTCCTAAAAATCTTCCCAGGTTTTCTGTGCCTGCATCCTCTACTGTCAATGGAACTGAGCTCACAGTTCAAGTTGATGATTCAAAAACTGGCAAATCACAAGCCTCCAGGGCACAGACAAAGTCAAAGAGTAGACCAACATTTAAAGAAAAAGTAGCCAGTCTCTTGTTCTCAAAGAGTAAGAAATCAACCAAGGAAAAGCCAAGTTCTCCTGAATCTAAAGATGAATCCCAACCCGCTCCTATCGTCACTGAAGCATTAGTTCTTCCAGCATATGCACCTGAAGTCCTTAGGGATGATGAGTCTCAAATCATCAATGTGGATAGTTTTGAAGAGTTTTCTCTTGTAGCTCTATGTGAATCATCAGAGAAAACTTCCACAAATTCAGTCGCTAACAGACAAGAAGAAGACATGATTACACTAGAGCCTGGATTGGCAGTGGCAGGGTCCATGATGCTAGAGATTAATTCGAGCCAAAGCCCAGATCAGCCTAGTCCATTCTCAGTGTTACAACCTCCATTTGAAGATGATAACAATAATGTATCTCATGAGTCCTTGGACCGCATGAAGAATGATCAACTTGGATCACAGGTGGAACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGATTCTTGTGCAGAAGTGGCAAGCCCCCATCTATTAAAACCCTTAATGGTTCCTTCCTTGGACTCCAAGATAGAGGAAAAAGAGTGGCTTCTCTTGGTCCACAACCTACTATCAGCAGCTGGACTTGATGACCAGCAGCAATATGACTCGTTTTACACCAGATGGTATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATTACTCAATGAGAAGGAGCCTCAGCCAATGCACGAGGGCAGAAGAAGGAAGATGAGATCAAATCACAAACTTGTGTTTGATTATATAAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAATGCTTAAAGGGCAGTGGGAACCTAATCCAAGAGAATGCACCGGAATCTACCATGTTGGTGGACCACATTGTGGCCAAAATAAAGGAATTAATGGCAAGTGGGGTGAGGTGTGAGTGGGACAGCAACAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGATTGTGCAGATAGGGTGGGTGGACCTTATGAAATTGGAGATAGACGTTTTGGGAAAGGAGATAGAGAGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGCTTGATTTTAATTTTCAAATTAAATAA 2661 0.4201 MQMLIDKEMSKQKDSKHYLPNVVAKLMGLETLPRGEPSLSMERSYRSAYPQQMNAPVGFPFRHWQQEDRFMDREILHEVHPSTEQVAYKEMYEIWQQSQRARHDRGRWSEDVDEKRMALIRQKFIEAKHLSTDERMRQSKQFKDALEVLSSNSDLLMRLLDSQNVYEFYSSRRTDTKRITLIKPLKMDDNDKPARKEKRNNRLIKKSPNVDQAAGWENTNSGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKDAVSPTTTSPPNLRSGNCHQGPEYDDAIQSXRVAKEITQQMXKGLWSYQKDKTPHYSSVISNGYSDDESSFNKSYHEYASANFSDLEATPMSPLPRLSWDYNYINGCSSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTSDKGPQEQTKVRRNSTLGEMLSLTHMKKSAKSVVESIQEDQEPGKSVSCSHSFNAEISIEGSPKNLPRFSVPASSTVNGTELTVQVDDSKTGKSQASRAQTKSKSRPTFKEKVASLLFSKSKKSTKEKPSSPESKDESQPAPIVTEALVLPAYAPEVLRDDESQIINVDSFEEFSLVALCESSEKTSTNSVANRQEEDMITLEPGLAVAGSMMLEINSSQSPDQPSPFSVLQPPFEDDNNNVSHESLDRMKNDQLGSQVELKSNLIDKSPPIESIARTLSWDDSCAEVASPHLLKPLMVPSLDSKIEEKEWLLLVHNLLSAAGLDDQQQYDSFYTRWYSLESPLDPSLRDTLLNEKEPQPMHEGRRRKMRSNHKLVFDYINAALLELVGYGSEKCLKGSGNLIQENAPESTMLVDHIVAKIKELMASGVRCEWDSNSLVVENVVRKEIVQIGWVDLMKLEIDVLGKEIERDLIQELVENAVLDFNFQIK* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1034 886 Pfam Protein of unknown function (DUF3741) 121 164 IPR022212 -
Vra8g1034 886 MobiDBLite consensus disorder prediction 212 231 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 253 270 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 184 198 - -
Vra8g1034 886 PANTHER DUF3741 FAMILY PROTEIN 1 882 - -
Vra8g1034 886 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 882 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 484 500 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 517 540 - -
Vra8g1034 886 Pfam Domain of unknown function (DUF4378) 712 875 IPR025486 -
Vra8g1034 886 MobiDBLite consensus disorder prediction 484 503 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 614 641 - -
Vra8g1034 886 MobiDBLite consensus disorder prediction 184 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1034 Vra-Chr8 23888930 23893495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1034 1 881 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 36.670 5.65e-134 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1034 - - pvu:PHAVU_007G155800g 1420.6