Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1029 ATGATCATTGGCTGCTTGCCCATAACTAACCATTTTATGCTTTCTTGTTGTCTTGGGGCTATATTCTCAGGGTTCATTAAAACATTCAACCTTCAAGACAGAAAAGTGTGCAGTTACAGTCGTAGAATGGGAGAACTGAAGCTACTGGGAGTTTGGCCTAGTTCATTCGTTTACAGGATCATATGGGCGTTAGAACTGAAGGGCATAAAGTATGAGCATGTACAAGGAGAATTCCACAACCCTGATTTCAGTGATTTGCTACTGAAGTATAACCCAGTTTACAAAAAGGTTCCTGTCCTTGTTGTTGATGGAAAGCCAATTGCAGAATCCACTGTCATTCTTGAATACATAGAGGAAAGATGGCCACAGCCACCCATGCTTCCACAGGACCCATATGAGAGGGCCGTGGCACGGTTTTGGAGTACTTCGTTTATGTCATTCTTTGTGGCTGTTGGAGAAGATTTTCAGAAGGCAACAAAGGAAGTAAGAGAAGTGCTTAAAGTATTAGAAGAAACCATTGGGGACAAAAAGTATTTTGGTGGTGAAGAAATTGGAATTTTGGACATAACCTTGGGATGGATACCCTTGTTCTTTGGAGTCATTGAAGATATTGTTGGTGTAAAGGTGTTGGTAGTTGATGATTTTCCCCGCTTGTTTACTTGGATTCGGAACTTCAGTGAGCACCCCTCTATCAGAACGAACTTTCCAAGTCACCATGAGTTGTTTGGTTATTACAAGCAAAAGAGAGACTATTATTCCACCCAATACAGCATGAATGCAGGCATGAACTGA 792 0.4141 MIIGCLPITNHFMLSCCLGAIFSGFIKTFNLQDRKVCSYSRRMGELKLLGVWPSSFVYRIIWALELKGIKYEHVQGEFHNPDFSDLLLKYNPVYKKVPVLVVDGKPIAESTVILEYIEERWPQPPMLPQDPYERAVARFWSTSFMSFFVAVGEDFQKATKEVREVLKVLEETIGDKKYFGGEEIGILDITLGWIPLFFGVIEDIVGVKVLVVDDFPRLFTWIRNFSEHPSIRTNFPSHHELFGYYKQKRDYYSTQYSMNAGMN* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1029 263 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 43 255 IPR045073 -
Vra8g1029 263 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 130 252 IPR010987 -
Vra8g1029 263 Pfam Glutathione S-transferase, C-terminal domain 158 223 - -
Vra8g1029 263 Gene3D Glutaredoxin 40 126 - -
Vra8g1029 263 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 44 125 IPR004045 -
Vra8g1029 263 CDD GST_C_Tau 131 247 IPR045074 GO:0004364|GO:0006749
Vra8g1029 263 SFLD Main.3: Omega- and Tau-like 43 255 IPR045073 -
Vra8g1029 263 SUPERFAMILY Thioredoxin-like 46 148 IPR036249 -
Vra8g1029 263 Pfam Glutathione S-transferase, N-terminal domain 45 118 IPR004045 -
Vra8g1029 263 SUPERFAMILY GST C-terminal domain-like 119 251 IPR036282 -
Vra8g1029 263 Gene3D - 127 255 - -
Vra8g1029 263 SFLD Main (cytGST) 43 255 - -
Vra8g1029 263 CDD GST_N_Tau 46 121 - -
Vra8g1029 263 PANTHER - 43 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1029 Vra-Chr8 23870267 23871857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1029 45 257 Glutathione S-transferase Gene Family AT2G29420 38.914 2.31e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1029 K00799 - gmx:100500361 371.703