Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1026 ATGGAAAACTTTTTTCGCTTAGTTGATTGTGAGGAAACGTTCTCAAAACGTTGCGTTTGGGTCAACGGTCCTGTGATCGTAGGTGCAGGTCCTTCAGGACTAGCCACAGCAGCTTGTCTAAAACAACAAGGGATACCCTTCATGCTTCTCGAAAGAGCAGAATGCATAGCCTCACTTTGGCAAAAACGAACCTACGACAGATTAAAACTCCATCTTCCCAAACAGTTCTGTCAGCTCCCCAACCTTCCATTCCCACCACACTTCCCCCAATACCCTTCCAAGAAACAGTTCATAGATTATCTCGAATCCTACGCACAGCACTTCGACCTAAACCCACGATTCAACCAGTGTGTCCAGTCTGCTAGGTACGATGAAACCNGCGGCTTCTGGAGGGTAAAAACCGTTGCCACCTGTGGCTCTGTGAAGAATGAGTTTGAGTACATTTGTAGGTGGCTGGTGGTGGCCACCGGAGAGAATGCGGAGTGCGTGATGCCTGAGATAGAAGGCTTGAAGGAATTCAAAGGGGACGTTATTCATGCATGTGAGTATAAATGTGGAGAAAGATTCAAGGGGAAGAAAGTTCTTGTTGTTGGTTGTGGCAACTCTGGCATGGAACTCTCACTCGACTTGTTTAACCACAGTGCTTCTCCTTCCATCGTTGTTCGCAGCTCGGTTCATGTGTTGCCTAGAGAAGTGTTTGGGAAGTCAACGTTTGAATTGGCAACTTTGATGCTGCAATGGTTGCCACTTTGGGTGGTTGACAAAATTCTGTTGGTGCTGGCGTGGTTGGTGTTGGGGAACATGGAGAAGTTTGGGCTGAAAAGACCTTTGGAAGGTCCTTTATCGTGGAAGAACAGAAAGGGTAAGACTCCTGTTTTGGACATTGGAACGTTGGAGAAAATTAAATCGGGTGACATAAAAGTTGTTCCAGCCATAAAGAGATTCGACAATGGATGCGTGGAGCTTGTTAATGGTGAAAAGCAAGATGTTGATGCAGTGGTGCTTGCAACAGGGTATCGTAGCAATGTCCCTTCTTGGCTTGAGGAAGGTGAATTTTTCTCTGAGAATGGTTTCCCAAAGTGTCCATTCCCAAATGGTTGGAAAGGAAATGTTGGACTTTATGCTGTTGGGTTTACAAGGAGAGGGCTCTCAGGTGCCTCATTCGATGCTATCAAAATTGCTCAAGACATTGCTCAACTTTGGAAACAAGACACTAAGCCAAATAAACATCGTACCACTGCATCTCATAGACGTTGCATTTCTCAGTTCTGA 1272 0.4568 MENFFRLVDCEETFSKRCVWVNGPVIVGAGPSGLATAACLKQQGIPFMLLERAECIASLWQKRTYDRLKLHLPKQFCQLPNLPFPPHFPQYPSKKQFIDYLESYAQHFDLNPRFNQCVQSARYDETXGFWRVKTVATCGSVKNEFEYICRWLVVATGENAECVMPEIEGLKEFKGDVIHACEYKCGERFKGKKVLVVGCGNSGMELSLDLFNHSASPSIVVRSSVHVLPREVFGKSTFELATLMLQWLPLWVVDKILLVLAWLVLGNMEKFGLKRPLEGPLSWKNRKGKTPVLDIGTLEKIKSGDIKVVPAIKRFDNGCVELVNGEKQDVDAVVLATGYRSNVPSWLEEGEFFSENGFPKCPFPNGWKGNVGLYAVGFTRRGLSGASFDAIKIAQDIAQLWKQDTKPNKHRTTASHRRCISQF* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1026 423 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 421 - -
Vra8g1026 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Vra8g1026 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Vra8g1026 423 Gene3D - 24 407 IPR036188 -
Vra8g1026 423 Pfam Flavin-binding monooxygenase-like 26 348 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vra8g1026 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Vra8g1026 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Vra8g1026 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 421 - -
Vra8g1026 423 SUPERFAMILY FAD/NAD(P)-binding domain 191 398 IPR036188 -
Vra8g1026 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 301 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1026 Vra-Chr8 23774301 23776285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1026 K11816 - gmx:100807325 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1026 8 23774301 23776285 Vra3g0327 3 3873022 3875211 PCT