Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0995 ATGGATTTGGTTGATGAAATGAATGAGGAATTAAATACGGATGAAGAGAGTAGTTTGAGGTTGGTTCCTACTTTGGACATGTCTTTTGACACAATGCAAGATGCAAAGAAATTTTATCAAGACTACGGTAGAAGAAGTGGATTTGGCATTCGAACCAGAACTTCTAAAAAGGATAGCAAGAACGTGGTGTATTACTTGAGATTGGTTTGTTCTAGGGAAGGTAAATATGTTTCCAGCATTCGTCCAGAGGTCAAAACTCTTCCCAGTCAGACTAATCAATGCCTTGCTGGAATAACCATTGCACGAAAAAAAGACAAATGGTTTGTTAGAACTGTAGTTTTAGATCACAGTCATGAGCTGTGTCCACAAACCTCCAATCTAATCCGTGGTAATAGGCAATTGAACATGCATGCCAAACACACTTTGGAAGTGAATGATGATGCTGGTGTTCGTATTAATAAGAGTTTCCTTAGCATAGTTAGTGAAGCGGGTGGATATGAAAACATGCAATTTGTTGAACGAGATGCTAGAAACTACATTGGTCAGCATAAAAGGTCACTGTGTAAGGAAGGTGATGGACAAGCATTGCTTCGACACTTTTCAAAAATGAGAGACCAGAATAATGAATTCTTCTATGAAATCGAGATGGATGAAGATAATAGAATTACTAGTGTCTTTTGGGTAGATGCTCAAAGCCGAGCTGCATGTGAGGAGTTTGGTGATGTCGTGTCGTTTGACACCACGTACTTAACCAACAAGTACGACATGCCATTTGCTCCATTTGTAGGAGTTAATCACCATGGACAATCGATCTTACTTGGTTGTGGATTGCTGTCATCAGAGGACACTTATTCATTTATATGGTTATTCAAATGTTGGTTAAGATGCATGGGAAACAAGGCGCCGAACAATATTGTAACTGATCAATGCAAGGCCATGGCAAATGCAATTGAAGAAGTGTTCCCAAAAACAAAACATAGGTGGTGTTTGTGGCACATTATGAAAAAAATACCTGAAAAATTTCAAGGGTATAAGAATTATGTTGGAATCAAGTGTGATATAAAAGTGGTTGTCTATGAATCTGTTAGTGCAATTGACTTTGAAACTGGTTGGAAACGACTACTTACCACACATGGCTTGGAAAATAATGATTGGCTATGTAATTTGTACGAAGAGAGAGGGAAATGGGTTCCATGTTACTTGAAGAATCACTTTTGGGCTGGTATGTCAACTACTCAAAAAAGCGAGGGAATGAATGCTTTCTTTGATGGTTTTATTAATTCCACTACCACACTGCAACAATTTGTGATTCAATATGATAATGCTTTAAAAGTAAAGGCCCAAAAAGAAATAGAAGCTGACTTTGCCTCTCTAAATACAAAAGTTGCATGTGGGTCTCAATCACCAATTTAG 1413 0.3793 MDLVDEMNEELNTDEESSLRLVPTLDMSFDTMQDAKKFYQDYGRRSGFGIRTRTSKKDSKNVVYYLRLVCSREGKYVSSIRPEVKTLPSQTNQCLAGITIARKKDKWFVRTVVLDHSHELCPQTSNLIRGNRQLNMHAKHTLEVNDDAGVRINKSFLSIVSEAGGYENMQFVERDARNYIGQHKRSLCKEGDGQALLRHFSKMRDQNNEFFYEIEMDEDNRITSVFWVDAQSRAACEEFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTYSFIWLFKCWLRCMGNKAPNNIVTDQCKAMANAIEEVFPKTKHRWCLWHIMKKIPEKFQGYKNYVGIKCDIKVVVYESVSAIDFETGWKRLLTTHGLENNDWLCNLYEERGKWVPCYLKNHFWAGMSTTQKSEGMNAFFDGFINSTTTLQQFVIQYDNALKVKAQKEIEADFASLNTKVACGSQSPI* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0995 470 Pfam MULE transposase domain 242 336 IPR018289 -
Vra8g0995 470 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 463 IPR031052 GO:0006355
Vra8g0995 470 PANTHER OS03G0843700 PROTEIN 9 463 - -
Vra8g0995 470 Pfam FAR1 DNA-binding domain 37 121 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0995 Vra-Chr8 22480149 22481561 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra8g0995 MULE 3.4e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0995 - - var:108341250 832.402