Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0974 ATGGAGAACCAGCAGAAGCAAAATTGGTTCGAAAAGGCAAAGCCATTGGCAGCAGTGGTATCAATGCAGTTTGGATACGCAATCATGGATGTTTTATCCAAAGCTGCACTGAACAAAGGGATGAGCAATTATGTGTTCGTCGTTTATCGCCAAGCAGTTGCATTCCTTGTCATGGCTCCTTTGGCATGGTTTTTTGAGAGGAGGAAAGCAAAGCCAAAGATGACACTCTCAATTTTCATCAAGATTTTGGTGCTGAGCTTGATAGAGCCAGTTATTGACCAGAATCTGTATTTTTTGGGGATGAAGTACACAACAGCAACCTTTGCCGTTACGATCACCAATATGCTTCCTGCTATCACCTTTATCTTTGCTTGGATTCTTAGGCTTGAGCAAGTAAATATAAGAAGTATACGAAGCCAAGCAAAGGTGGTGGGAACTGTAGCAACTGTTTCGGGTGCCATGATCATGACACTGATTAAAGGGCCAGTGCTTTTTGGGTCACACGGAGGCAATGATCAATCCCAGCATAATGGCACAAGCACTCAGCATACAATCATAGGGTTCATAATGATGACTATTGGATGCTTTTGCTGGGCTTCTTTCGTGATCTTACAGGCTATTACTCTGAAAAGCTACCCTGCTGCACTCTCTCTTTCTGCTTGGATATGCTTAATGGCCACAATTGAAGGTGCTGCAGTGGCTTTGGTCATGGAAAGGGGCAACCCTTCGGTTTGGTCTATAAAATTTGATATGAAATTGCTCTGTGCTGTTTATTCTGGCATAACATGTTCGGGATTGGCTTATTACTTGCAAGGAGTGGTGATGAAAAGTAAAGGCCCAGTGTACGTGACAGCATTTAGTCCTCTGTGCATGGTAATCGTGGCTATCATGGGCTACTTCCTTTTGGCTGAACAAGTTTTCCTTGGAAGAATGAGTGGTGCCATCATCGTTTGTTTGGGCCTATACTTTGTGGTGTGGGGAAAAAGCAAAGACAATTATGGCCCAGAAGACCCAAATACTCAAGAGCCCATAGAGGAAATGGACAATGCTAAGAAGGAAAATTTCACTTGCTGTACTCATGGAGTCACCACTGCCACCAACTTAGGAAATGGAAACACAACTCCAAGTGAAGAACAAGTGTGA 1143 0.4348 MENQQKQNWFEKAKPLAAVVSMQFGYAIMDVLSKAALNKGMSNYVFVVYRQAVAFLVMAPLAWFFERRKAKPKMTLSIFIKILVLSLIEPVIDQNLYFLGMKYTTATFAVTITNMLPAITFIFAWILRLEQVNIRSIRSQAKVVGTVATVSGAMIMTLIKGPVLFGSHGGNDQSQHNGTSTQHTIIGFIMMTIGCFCWASFVILQAITLKSYPAALSLSAWICLMATIEGAAVALVMERGNPSVWSIKFDMKLLCAVYSGITCSGLAYYLQGVVMKSKGPVYVTAFSPLCMVIVAIMGYFLLAEQVFLGRMSGAIIVCLGLYFVVWGKSKDNYGPEDPNTQEPIEEMDNAKKENFTCCTHGVTTATNLGNGNTTPSEEQV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0974 380 Pfam EamA-like transporter family 21 137 IPR000620 GO:0016020|GO:0016021
Vra8g0974 380 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Vra8g0974 380 PANTHER WAT1-RELATED PROTEIN 11 346 IPR030184 GO:0016021|GO:0022857
Vra8g0974 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 148 - -
Vra8g0974 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 330 - -
Vra8g0974 380 PANTHER WAT1-RELATED PROTEIN 11 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0974 Vra-Chr8 21879586 21882808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0974 1 377 Nodulin-like Gene Family AT2G37460 58.701 1.14e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0974 - - gmx:100811147 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0974 8 21879586 21882808 Vra8g0974 8 21879586 21882808 ECH
Vra3g0350 3 4208101 4210209 Vra8g0974 8 21879586 21882808 PCT