Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0955 ATGGTTTCCACCAGCATAGAGGAAGCAGAAGCTCTGATACTAAAATGGGACCCTGAAACCTCCGCCTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCTGAGGCCATGCATTACATCCACTGCGTTAACCAGCTTCAAAAAACTATGCACGCCTTGCTTGCACAGAACCCGTCTTCACGGAAACTCGTCCTCGCACAAAAACTTATGCAAATGGCCATGAAGAGGCTCCAGAAAGAGTTCTACCAGATATTATCCATGAGCCGGGCCCAACTCGACCCCGAATCTGTTTCCGCCAGATCCTCCACCACCTCTAGAACCTCTTTCTGTTCCGATAGCTACGACGAAGGCACGGCGGAAGACGACGTTCGTGACACAGGAGATTGTATCTCCGAAGTCGAACGCGTTTCCTCTGAAACCGTGGCGGTTCTCAAATCCATTGCCGACTGCATGGTTTCCAATGGTTACGGCAAGGAATGCGTCACAGTTTACACGACTATGAGAAAGTCGATCGTCGACGAAGGCTTGTATCGCTTAAGCGTGGAGGAATTGAGCGCTTCGAAGGTGAATAAGATGGACTGGGAAGTGCTCGAGTTGAAAATCAAGGGTTGGTTAGAGGCGGTTAAGATCGCCGTGAGGACGCTCTTCTCTGGAGAAAGGATTCTCTGCGATCAAGTCTTCGGTGCGTCACAATCCATCGCGGAGGCTTGCTTTGCCGAAATTTCGAGAAGCGGAGCCGCTCTGCTGTTCGGATTCCCCGATCTCGTTGTGAGAACGAAAAAATCCCCGCCGGAGAAGATCTTCCGAATAATTGATATGTACGCCACGATCGCTTCGCTGTGGCCGGAGATTGAATCGATATTCTCGTACGATTCAACAACCGCGTCTAAATCTCAAGCCTACGCTCTGCTTCTCCGACTCTCCGAGTCCGTACGAACGAGTTTCTCTGAAATTGAGACCACAATTCAGAAAGACTCTTCCAAAGCAATTTCAAAATTCGCCGGCGTCCATCCCCTGACTGTGCAAGTAATGAATCACTTGTCTACACTCGCTGATTACAGCAACGTGCTATCTGAAATTTTCTTCGACGTGCCGCCGCCATCGAGGTCGCCGTTACCGGAATCTTACTTGTACAGTCCCCAATCTGACAACTCCACGACAACGGCGACGAAATTCTCGGTGCAGATGGCGAGGCTGATTCTAGTCCTTCTTTGCAAGATCGACGGCAAGTCGAGGCATTGCAAGGAGGTTTCGTTATCTTACCTGTTTCTCGCGAACAATCTCCGGCACGTGGTAGCCAAGGTCCGAACCTCGAACTTGATTTACGTTGTGGGCGACGACTGGGTTTTGAATCACGAGGCAAAGGTGAAGCAGTTGATGGCAAACTACGAGAGAGTAGCATGGGGCAAAGTGATTTCGTCTTTGCCGGAAAATTCAGCGGCGGAAATGTCTCCAGCGGAAGCGAGGGTTGTGTTCGGGAATTTCAATTTAGAATTCGAGAAAGCTTACCGGAAAGAGAACGCGTTTAACATTCCGGAGCAGGAATTTCGTGAAGAGACCAAGGCGTCACTCGCAAGAAAAATAAGCCCTATTTACAGCGAGATGTATGAAACGCTCCGCAATTCAGTGGGATCGGCGAGGGAAATGAGAGAGTATGTCATATTTACCCCTGAAGATGTTGAGAACTACATGCTGAACCTTTTTTCCGCGGGAAGATCAAGCTCCACTACTGAAGAAAACAGTTCATTTTTTGTAAGAAAAAAATTGTGTAAGAAATGCAAATGA 1788 0.4877 MVSTSIEEAEALILKWDPETSAYGRVTSLFYNDKAEAMHYIHCVNQLQKTMHALLAQNPSSRKLVLAQKLMQMAMKRLQKEFYQILSMSRAQLDPESVSARSSTTSRTSFCSDSYDEGTAEDDVRDTGDCISEVERVSSETVAVLKSIADCMVSNGYGKECVTVYTTMRKSIVDEGLYRLSVEELSASKVNKMDWEVLELKIKGWLEAVKIAVRTLFSGERILCDQVFGASQSIAEACFAEISRSGAALLFGFPDLVVRTKKSPPEKIFRIIDMYATIASLWPEIESIFSYDSTTASKSQAYALLLRLSESVRTSFSEIETTIQKDSSKAISKFAGVHPLTVQVMNHLSTLADYSNVLSEIFFDVPPPSRSPLPESYLYSPQSDNSTTTATKFSVQMARLILVLLCKIDGKSRHCKEVSLSYLFLANNLRHVVAKVRTSNLIYVVGDDWVLNHEAKVKQLMANYERVAWGKVISSLPENSAAEMSPAEARVVFGNFNLEFEKAYRKENAFNIPEQEFREETKASLARKISPIYSEMYETLRNSVGSAREMREYVIFTPEDVENYMLNLFSAGRSSSTTEENSSFFVRKKLCKKCK* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0955 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 577 IPR004140 GO:0000145|GO:0006887
Vra8g0955 595 SUPERFAMILY Cullin repeat-like 5 569 IPR016159 -
Vra8g0955 595 MobiDBLite consensus disorder prediction 96 124 - -
Vra8g0955 595 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 2 577 - -
Vra8g0955 595 MobiDBLite consensus disorder prediction 96 115 - -
Vra8g0955 595 Pfam Exo70 exocyst complex subunit 205 566 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra8g0955 595 Gene3D Exocyst complex component Exo70 26 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0955 Vra-Chr8 21280448 21282235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0955 6 569 EXO70 exocyst subunit family AT3G09520 51.573 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0955 K07195 - gmx:100798477 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0955 8 21280448 21282235 Vra3g0358 3 4300271 4302568 PCT