Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0950 ATGGAAAAATTCTGCCACAGCAACTCCAACCACCAACCTTCTCTTCCTCAAGCTCCGAGGAACAAACAGGTTCATAGACAGAGACTACCTCCGAATCTGTCACCTGATTCTTGTTCAGGCGGTGGTGTTGCTGCAGAGAAGGATTCGTTTTCTCACAAATTTGGTTGGAGATCTTCGAAACAACTGCTTGGAACACCGATTAAGAAGTTATTAGACGAAGAGATGTCACCGAAATCTGAATCAAAAAGAAGATCCCCTGGAGTTATCGCCAGATTGATGGGTCTTGATGGACTGCCATTCCAGCAGCCTATTAATAAGCAGCATAAGGGTTTGTCTGAAAACCACCAGAAGACTCCACAATTGCAGAAAACACGCGGCAAAGGAGTGCCATATGACTGTGGATCATCTAGGAGAGGCTTAAGGGATCAGCAAGAATTTAAGGATGTATTTGAGGTTTCTGAGATTCCAAAGGTAGAGAGCAGTAGATATCCGTCGCCAGGGTGTGTAGACTTGAAGACCAATGATGCTGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTCATCAAGATTTACAGTCTTCAAAGGACTTCCGAGACACACTTGAGGTTTTGGATTCTAACAAGGATCTTCTGCTGAAATACTTTAAGCGGCCAGATTCTTTGTTTAAAAAACATCTAAATGATCTTCAAGCTGTTCCTCTTCAATCACATTATAGACATGCAGAAACTATGGATATTGAGAAGTATGAAGATGACTTAAGTTGGAGGTCAGATAGGGAGAAAACACGGTTGAACTACAATAGATCTCATGAAAGGCATCTTGATGGTTATCCTTGTCATTTTGACAAAAGACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAATTTCAGGGCAGACATGAACAAGACGCAGTCCCCACAAAGATTGTCCTCCTGAAACCCAATCTTGGAAAAGTGAAGAATGGTACCAGAATTGCATCATCACCTTGTTCTCATAATTTTCTGTCGGGGCATGAAGGAGACAGTGAACTGTGTCAAGTGACAAATTTGCCTGAAAGTGCAAGTTCTTGGAGGCAAGATTCTTTTGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAGAAATAGTCTTAACAATAGCGGCATGATGCTTTCAACTTCTAGAATTGCGGGATATGCTGGGGATGATAGTTCATGTAGTATTTCTGGAAATGAATCTCCTGACATATCTGGGGAAATAACTGCAACTTTGGGAAATTCATTTGACTTAAACAACCGTAGCAGGCGATCATCCCGTTCTGGTGAATCTTCTGTCAGTAGAGAGGCGAAGAAGAGATTGTCAGAGAGGTGGAAAATGACACACAAGTCTCAAGAGGTGCAGGGAATCAGCAGGAGCAGCACGCTGGCAGAAATGCTTTCTATCCCTGACAAAGATTTGAAGGCAGCAAATTTTGTTGGCACGGCTACTGGGGAAGGTTTCCATGATAAGTTTACTCCCAACAGTGAACCTGCTAAGTGGGTTGAACCATTGGGTATCAGCAGCAGGGATGGTTGGAAGGACGGCTGCATTGGTAGTTTGTCAAGGTCACAATCCCTTCCTTCTTCCTCCACATCCTTTGGAAGTCCTAAAACATTCTTGCGCACTGAAGCACTTTGTGCTGATCGATATATGGTGCCGAAGGAAGGCCATAAACGTGAGAGGAGAAGAGCAGCAAAGAGTCTTGATCATAGACATGGTGTAAATAACAGAAGCCCAAGATCCGGTCACAAGAAGTCTTGGTCTTTGCATTCGTCAAAGCTAGAAGTAGATGAGTTTTCTGCTGACTTACATACAGTTCAGAATAAAATGAATATCATTCTTGAAGATTCGGCCAAGCTTGAAGTTCCAAGTGCAGTTGCTGACGATGACACGGAGGTGACAAATGGAAGCATAGTTGAGTCTTCTGAACCTTTGAATAAGGTGCTTCCTGAATTATCTTCTCATGTGATTGAAGGCCATGGTGGTGCGGTTGGCAACGATTCAATACAGCAGGATCTATCAGCTGCGTCGCCTGATGGAAGTTCAGTCATCCATGAACCACCTGTTCCTGGACTTGAACCTTCTTGCTGTAAAGATGCTGATCAACCCAGCCCAGTCTCCATCCTAGAACCTGCTTTTACAGATGATCTGTCTTCTTGTTCTGAATGTTTTGAAAGTCTGAGTGCTGATCTACAAGGGCTACGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGATGACTATGCGGAGGGACCCATGACAGTAAGTGATGAAGATGGTGAGGAAGTATCTACGGGAATGTCAGCAGCAGACAAAGGATTATGTAGAACAACTGAAGATAGCTGGGAATGTTCTTACATTATGGATGTCTTGTCCGAATCTGGCATAGATGGAGTTCAGCTCGATACAATTTTAGAAGTTTGGCATTCCCTGGAATGCCCTGTGAGTCTTTCGGTGTTTGATGAACTTGAAAAAAGGTATAATGACGGGACAACTTGTTCAAGGTCTCAAAGGAGATTGCTTTTTGACCATATAAATATAGGAATTCTCAAGATCAGTGAGCAATTCTCTTTCTCTAGATCAGCAATAAAAAATGCCATTGGTTTTAATTTGACCAAAATTGGGTTCCGAGATGGCCTTCTGAGAATGGTAGTGAACGAAGCAAAAGTAAATGATGGTGGCCAGGGGAATGTAGTGCTTGGGGAATCTGAGTGGATGGACCTTAAAATTTACACTGATGCAATAGCCAAGGAAGTTGAGAGATCATTGTTAGATGATTTAGTGGCAGAAGTAATCGGTACCTAG 2853 0.4269 MEKFCHSNSNHQPSLPQAPRNKQVHRQRLPPNLSPDSCSGGGVAAEKDSFSHKFGWRSSKQLLGTPIKKLLDEEMSPKSESKRRSPGVIARLMGLDGLPFQQPINKQHKGLSENHQKTPQLQKTRGKGVPYDCGSSRRGLRDQQEFKDVFEVSEIPKVESSRYPSPGCVDLKTNDAEMSFIEQKFMDAKRLATHQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNDLQAVPLQSHYRHAETMDIEKYEDDLSWRSDREKTRLNYNRSHERHLDGYPCHFDKRHVMHSSPKSSKLQFQGRHEQDAVPTKIVLLKPNLGKVKNGTRIASSPCSHNFLSGHEGDSELCQVTNLPESASSWRQDSFESREIAKEITRQMRNSLNNSGMMLSTSRIAGYAGDDSSCSISGNESPDISGEITATLGNSFDLNNRSRRSSRSGESSVSREAKKRLSERWKMTHKSQEVQGISRSSTLAEMLSIPDKDLKAANFVGTATGEGFHDKFTPNSEPAKWVEPLGISSRDGWKDGCIGSLSRSQSLPSSSTSFGSPKTFLRTEALCADRYMVPKEGHKRERRRAAKSLDHRHGVNNRSPRSGHKKSWSLHSSKLEVDEFSADLHTVQNKMNIILEDSAKLEVPSAVADDDTEVTNGSIVESSEPLNKVLPELSSHVIEGHGGAVGNDSIQQDLSAASPDGSSVIHEPPVPGLEPSCCKDADQPSPVSILEPAFTDDLSSCSECFESLSADLQGLRMQLQLLKLESDDYAEGPMTVSDEDGEEVSTGMSAADKGLCRTTEDSWECSYIMDVLSESGIDGVQLDTILEVWHSLECPVSLSVFDELEKRYNDGTTCSRSQRRLLFDHINIGILKISEQFSFSRSAIKNAIGFNLTKIGFRDGLLRMVVNEAKVNDGGQGNVVLGESEWMDLKIYTDAIAKEVERSLLDDLVAEVIGT* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0950 950 Pfam Domain of unknown function (DUF4378) 800 946 IPR025486 -
Vra8g0950 950 PANTHER AFADIN 32 948 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 571 604 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 102 137 - -
Vra8g0950 950 Coils Coil 740 760 - -
Vra8g0950 950 Pfam DUF761-associated sequence motif 79 99 IPR032795 -
Vra8g0950 950 PANTHER AFADIN 32 948 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 443 465 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 1 46 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 430 472 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 105 123 - -
Vra8g0950 950 MobiDBLite consensus disorder prediction 676 698 - -
Vra8g0950 950 Pfam Protein of unknown function (DUF3741) 182 226 IPR022212 -
Vra8g0950 950 MobiDBLite consensus disorder prediction 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0950 Vra-Chr8 21103402 21108863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g0950 64 948 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.044 1.85e-128 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0950 - - ccaj:109788117 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0356 3 4274269 4280265 Vra8g0950 8 21103402 21108863 PCT